|
Name : PSPPH_A0117 (PSPPH_A0117) Accession : YP_272227.1 Strain : Genome accession: NC_007274 Putative virulence/resistance : Unknown Product : ISPsy2, transposase truncated Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3039 EC number : - Position : 100022 - 100873 bp Length : 852 bp Strand : - Note : identified by match to protein family HMM PF01609 DNA sequence : GTGGGACTGGGGACGTCTAAAGTTCAGCCCCCGTCATCACCTGGCCACACCTCGTACTGTGGCGTTCAACTCGGGTATGC CGGCAAGCGCAAGCAGACCCGTAAGGAATTGTTCCTGATCGAGATGGATCAGGTGGTGCCCTGGAAAGGTTTGATTGCCC TGATTGAGCCCTATTATCCAAAAGGAGAAGGTGGCCGGCCCGCCTACCCACTGATGGCGATGCTGCGTGTTCATCTGATG CAGAACTGGTTCGGCTACAGCGATCCGGCGATGGAAGAAGCGCTGTATGAGACGACCATCCTGCGTCAGTTTTCAGGCCT GAGCCTGGAGCGCATTCCAGACGAAACCACGATTCTCAACTTCCGTCATCTGCTGGAAAAGCACGAGTTGGCGACCGGGA TTCTCGGCGTAATTAATGGTTATCTGGGCGACCGTGGCTTGTCGTTGCGTCAAGGCACCATCGTCGATGCCACGCTGATC CACGCGCCCAGTTCGACCAAGAACAAGGATGGCAAACGCGATCCTGAGATGCATCAAACCAAGAAAGGTAACCAGTACTA TTTCGGCGCCAAGGCTCACATCGGCGCCGACGACGAGTCAGGCCTGGTGCACAGCGTGGTAGTAACAGCGGCCAATGTGG CAGACGTCACGCAGGTTGCCAAACTGCTACACGGCGAGGAAAACGTAGTCTGCGCCGACGCAGGTTACACCGGGGTTGAG AAGCGCGAAGAACATGCTGGGCGCAAGGTCATTTGGCAGATTGCCGCCCGCCGCAGCACTTACAAAAAGCACGGAAAACG CAGTGTTTTGTACAAGGGGGAGTATCAGTTTTTTTGTGTTCGGGCTGGTTAG Protein sequence : MGLGTSKVQPPSSPGHTSYCGVQLGYAGKRKQTRKELFLIEMDQVVPWKGLIALIEPYYPKGEGGRPAYPLMAMLRVHLM QNWFGYSDPAMEEALYETTILRQFSGLSLERIPDETTILNFRHLLEKHELATGILGVINGYLGDRGLSLRQGTIVDATLI HAPSSTKNKDGKRDPEMHQTKKGNQYYFGAKAHIGADDESGLVHSVVVTAANVADVTQVAKLLHGEENVVCADAGYTGVE KREEHAGRKVIWQIAARRSTYKKHGKRSVLYKGEYQFFCVRAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp-33 | AAN62255.1 | transposase | Not tested | PAGI-3(SG) | Protein | 1e-102 | 92 |
| tnpA | AAF71487.1 | TnpA | Not tested | Hrp PAI | Protein | 4e-73 | 82 |
| PSPTO_1407 | YP_003355052.1 | ISPssy transposase or derivative | Not tested | Hrp PAI | Protein | 6e-73 | 82 |
| unnamed | AAO33449.1 | putative transposase | Not tested | Not named | Protein | 3e-47 | 62 |
| tnpA | ACF06175.1 | putative transposase | Not tested | Tn5036-like | Protein | 3e-44 | 48 |
| tnpA | ACF06178.1 | putative transposase | Not tested | Tn5036-like | Protein | 3e-44 | 48 |
