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Name : hopD1 (PSPPH_A0010) Accession : YP_272137.1 Strain : Genome accession: NC_007274 Putative virulence/resistance : Unknown Product : type III effector HopD1 Function : - COG functional category : - COG ID : - EC number : - Position : 7147 - 9279 bp Length : 2133 bp Strand : + Note : - DNA sequence : ATGAATCCTCTACGATCTATTCAACACAACATTACAACTCCCCCAATCAGTGGCGGTCAGCCATTAGACGCGGTGGGCCC TCAGGCCCAGCAATCCCATCCTAAAAGGATTTCACCTTCTCAATTGAGCCAAAGCGCTCACCAGGCTCTAGAACGCCTTT CAGCTAATGCCGAACACCAACGCCTTGCATCACTGGTACGCAACGCTCTGCAGGATGGCACATTTCAATTTCAATCCAGT AACCACACGCAAGTAACCTATAAAGCGTCAATCTGTCTGCCAGCTGACACCGATACCGTGAGAACCGACCACTTGATTAA TAACGAGCTGACGGTTCAGGCCCGATTAAATGATCAATCGGAGTACGACATCGTCAGCGCACATTTGCATGGCTCTTCGA AAGCCATATCCTTCGACGTACCCAGCCCCCCACCCGCACATGGTTCAGCATCTTCTGTCTTGAGTGAACGGACCCATCTA GGTATGAGTAGCGTTCTCTCACAAGATGCAGTGGATAGCAGTAGCCTGGAAACTCCGTTAGTGAGCTCGCCAGACCATTC TCGTCCGCCATCACAGCCAAAGCCCGTGCATATCGGGTCGGTCCGCAGGGACTCTGGTAGCCTTGTTTCCGATAACCCGG TAGTGCAGGCCCTGCTATCGTTTGTGCAGGCCGACCAGGCATTTCCACCACAGGCCGCGAGCATTGCCGGGGTCCAGCTG GAAATGCGGTCACGTCGGGATATTGAGCAAGCACTTGAGGAATTAAAAGGCGCCTTCACGGTGGAGAAGGCGCAACTGAT GTCCGGGGGCAGCTCGTCGGAGCGGGTAGATGAGGACGTCAACGCAGACATCCATATACCCTTATTGCTCAAGGCTATCG AGCGGGGGGCTGGGGCATTTGGCCCAGGCGCGTTGATTGAGATCGCGGATGGCGGCCAGATAAGCGCGAAAGCATTTCTC GCCTCATGTGCTCCCACGATCACGTCCAATGACGATGTCCTCTCCGAGTTCATCAACCAGAAACTCAAGGGGGACGACGA TCTTCAGGTTCGCCTGGGCGCACAGGAATTGTTGCATGTAGCCACCAAGAAGGAATTCCAGCTCGGCGGTCTAGCCGGCA GCATCGGGGTCAGCAGCATACTCGGCTCGGCATGGGAGCTTGGCGCTTCTGAGCTTTTGAAAAATGCCATCTTCGGCAAA AATTTCTCACCGAGCCAATATGCCCTGCAATTGGCTGGAATCGATTCAGTGCCTCCTTTTATTATCGAGGCCATGGACTC CTTTTGCGTACTTGTCATCATCAAAGGCATGAAAGGTGAGTTGTGGTCCATGAAAGATCTACTCCCCAAGGCGTTGAAGG CAGGCGCCATCTCCTCGGCGATGTCATTCCCCAATAATGTTTTGCAGTACGCAGGCTTCAAATCCAGAGTCGCCGATCTT GCGGCAAACTCGATAACAACTGAAGCGGCCATCTTTGGCGCCGCCTCCGGTATCCCACCCGAGGTCAAGGAAAGTGAAGA GCTGATGCGTGCTGGCTTATTCCAGAGCATGAAGGACGGCGTGATGGCTCATCCAGGCGAGGGGATGGATACCAAAGAGA CGATTGAGCGGATGACGCGCCATGCGCTGGATATTGCTCCGGGTGAGAGCACCGCTGTCAAGTCCATGGGACTGGCAGCG ATTGTCGGGATGATTCCACTGATTGCCAGCAGCAAGGCAACCGGGCTAGTGTCGGAACAGATACTGCGTATTTTCCGGAA CGCCGTCTTCAATCCAATCGAAGCCATCGCTCTGAACGCGTTGGCGCTTGGCGGGCGTGTCAACGTTCCCGGGCTATTTG ATTCCGACAATGCCAAGCATGCACGCGTGGCACAAACCATCCTTGCGCGGGCCAGCCAGCACATGGAAGCTGGAGACCGT GAAATTTCCGCAGAGGAGCTACATCAAATGCTGGCTCCCCGGAGCGAGTTCCTGCGCCATGTGGGATCTGCGATTGTCAA CGGCATGAATGCCAGCTTTGAGGCAATTCCCGCCCTGGTTCGGAAGCTTGGATACGGTGAGGCTCCATTGGCCGAACGTA TTCCGTATCAAGACCTGGCTGTGCCCGACACGTCGCGGCAGCCCGCACCCTGA Protein sequence : MNPLRSIQHNITTPPISGGQPLDAVGPQAQQSHPKRISPSQLSQSAHQALERLSANAEHQRLASLVRNALQDGTFQFQSS NHTQVTYKASICLPADTDTVRTDHLINNELTVQARLNDQSEYDIVSAHLHGSSKAISFDVPSPPPAHGSASSVLSERTHL GMSSVLSQDAVDSSSLETPLVSSPDHSRPPSQPKPVHIGSVRRDSGSLVSDNPVVQALLSFVQADQAFPPQAASIAGVQL EMRSRRDIEQALEELKGAFTVEKAQLMSGGSSSERVDEDVNADIHIPLLLKAIERGAGAFGPGALIEIADGGQISAKAFL ASCAPTITSNDDVLSEFINQKLKGDDDLQVRLGAQELLHVATKKEFQLGGLAGSIGVSSILGSAWELGASELLKNAIFGK NFSPSQYALQLAGIDSVPPFIIEAMDSFCVLVIIKGMKGELWSMKDLLPKALKAGAISSAMSFPNNVLQYAGFKSRVADL AANSITTEAAIFGAASGIPPEVKESEELMRAGLFQSMKDGVMAHPGEGMDTKETIERMTRHALDIAPGESTAVKSMGLAA IVGMIPLIASSKATGLVSEQILRIFRNAVFNPIEAIALNALALGGRVNVPGLFDSDNAKHARVAQTILARASQHMEAGDR EISAEELHQMLAPRSEFLRHVGSAIVNGMNASFEAIPALVRKLGYGEAPLAERIPYQDLAVPDTSRQPAP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| avrPphD1 | AAO33448.1 | AvrPphD1 | Not tested | Not named | Protein | 0.0 | 90 |
