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Name : serS (SAR11_0978) Accession : YP_266390.1 Strain : Candidatus Pelagibacter ubique HTCC1062 Genome accession: NC_007205 Putative virulence/resistance : Unknown Product : serine-tRNA ligase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 958299 - 959558 bp Length : 1260 bp Strand : + Note : - DNA sequence : ATGCATAATATTAAAAAAATTAGAAATGATGTTGAGGCTTTTAAAAAAGCTTTGAATAAAAGATTTATAGAAATAGATGT GGATAAGATTTTATCGTTGGATGAGAATAATAGAGATTACATCCAACAAAGAGAATTACTTGAAAAAGAAAAAAAAGATA TCTCAAAGTCTAAAGATCAATCACTTTTTGAAAAATCAAAAAAGATAACTGTTGAAATAGATAATATTAGTAAATTACAA GCTGGTGTTAAAAATGAATTGGAAACAATTTTGTCATCAATACCAAATATACCTCATCCAGACGTTCCTACAGGTAAAGA TGAAAACTCAAATGTAGAAATTTCTAAATCAGGAACAATACCAAATTTTAAATTTAAACCTAAATCACATTATGAATTAG GTGAAAACTTAAACATGCTTGATTTTGATCTAGCAACGAAAACTACTGGTTCAAGATTTGTTTTTGTAAAAGATAAATTG GCCATGCTAGAAAGAGCTTTATCAAATTTTATGCTTGATACACATGTGAATACTAATGGTTATGAAGAAATATCTCCGCC ACTAATTGCAACAGATGCCACTATGTATGGTACGGGACAATTACCTAAATTTGATAATGACCAGTTTGAACTTAAATTAG ACGACTCTAGTGACAGAAAATTTTTAATTCCAACTGCTGAAGTTATTTTAACCAATATTGTAAAAGACCAAATTATTGAT AAAAAAAAACTTCCAATGCGAATGGTTGCCTCAACACCCTGTTTTAGAAAAGAAGCAGGAAGTTATGGTAAAGATACTAA GGGAATGATTAGACAGCACCAATTTTACAAAGTTGAAATGGTGAGTATTGTTGAAATTGATAAGTGCTTACCAGAACTTG ATAGAATGACTGATTGTGCAACTAAAATTTTAGATTTACTAAAACTTCCATACCGAAAAATTGTTTTATGTACTGGTGAT ATGGGTTTTAGTGCTGAAAAAACTTTTGATATTGAGGTGTGGCTTCCATCAGAAGATAAATACAGAGAAATCTCAAGTTG CTCTTCATGTGGATCATTTCAAGCTAGAAGAATGAAAGCCAGATATAAAAACGAAAAAAAAGAAACTGTGCTTGTTGGCA CCTTAAACGGCAGTGGTTTAGCAGTTGGTAGAACATTAGTTGCTATATTAGAAAATTATCAACAAGAAGACGGGTCTATT CTAGTGCCAGAAGCTTTAAAGCCTTATATGAATAATATTGAAAAAATCGTTAAGATTTAA Protein sequence : MHNIKKIRNDVEAFKKALNKRFIEIDVDKILSLDENNRDYIQQRELLEKEKKDISKSKDQSLFEKSKKITVEIDNISKLQ AGVKNELETILSSIPNIPHPDVPTGKDENSNVEISKSGTIPNFKFKPKSHYELGENLNMLDFDLATKTTGSRFVFVKDKL AMLERALSNFMLDTHVNTNGYEEISPPLIATDATMYGTGQLPKFDNDQFELKLDDSSDRKFLIPTAEVILTNIVKDQIID KKKLPMRMVASTPCFRKEAGSYGKDTKGMIRQHQFYKVEMVSIVEIDKCLPELDRMTDCATKILDLLKLPYRKIVLCTGD MGFSAEKTFDIEVWLPSEDKYREISSCSSCGSFQARRMKARYKNEKKETVLVGTLNGSGLAVGRTLVAILENYQQEDGSI LVPEALKPYMNNIEKIVKI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-85 | 51 |
