Gene Information

Name : SAR11_0850 (SAR11_0850)
Accession : YP_266269.1
Strain : Candidatus Pelagibacter ubique HTCC1062
Genome accession: NC_007205
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 820208 - 820873 bp
Length : 666 bp
Strand : -
Note : -

DNA sequence :
ATGGATAGTCTTCTTAAGCTAAAAAACGTTAATCTTAAATACCAAACTGGTAATGATACTATTAAGGTTTTAAAGAATAT
TAATTTAGAAACTAAAAAAAATGAGTCTATTTCAATAGTGGGTGAAAGTGGATCTGGAAAAACTAGCTTAATCATGCTTG
CTGGGGGACTAGAGAAAGCAACCTCTGGTAAGATATTTTTTGAAGATCAAGAAATATCTAAAATGAGTGAAGATGAAGTT
TCTAAAATTAGAAGAAAAAATATTGGTATTGTTTTTCAATCTTTCTATCTTATTCCAAATTATACTGCTGTTGAAAATGT
TGCTCTAACCTTAGAGTTAAATAATTTAAAAAACCCTACTGAACGAGCCAAAGAGTTGTTGGATCGATTTGGACTAAAAA
ATAGATTTAATAATTTACCTAGTCAACTTTCAGGTGGTGAACAACAACGTGTAGCAATTGCTAGAGCTATAGCCATGAAA
CCTAAGCTAATTTTGGCAGATGAACCTACGGGAAATTTAGATAGTGAAAATTCACAAATGATTGCAGATATTTTATTCAA
ATATATTAAAGAAGAAAAATCATCTTTAATTATGGTCACCCATGACCCAAAACTTGCAAATAAAGCAAAAAGAAAAATTA
AAATCAAAGATGGAAAAATTGTCTAA

Protein sequence :
MDSLLKLKNVNLKYQTGNDTIKVLKNINLETKKNESISIVGESGSGKTSLIMLAGGLEKATSGKIFFEDQEISKMSEDEV
SKIRRKNIGIVFQSFYLIPNYTAVENVALTLELNNLKNPTERAKELLDRFGLKNRFNNLPSQLSGGEQQRVAIARAIAMK
PKLILADEPTGNLDSENSQMIADILFKYIKEEKSSLIMVTHDPKLANKAKRKIKIKDGKIV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55232.1 unknown Not tested SaPIbov2 Protein 2e-23 43
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-24 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 2e-24 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SAR11_0850 YP_266269.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-34 45
SAR11_0850 YP_266269.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 3e-31 42
SAR11_0850 YP_266269.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 1e-29 42