Gene Information

Name : glnA (SAR11_0747)
Accession : YP_266169.1
Strain : Candidatus Pelagibacter ubique HTCC1062
Genome accession: NC_007205
Putative virulence/resistance : Virulence
Product : glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 728960 - 730366 bp
Length : 1407 bp
Strand : -
Note : -

DNA sequence :
ATGACTGCTGCCAATGTTCTAAAATTCATGAAGGAAAAAGAAGTTGAATTTGTTGATTTAAGATTTACTGACCCTCGAGG
AAAACTTCAACATTTAACAATGGATCACACTATCGTTGATGAAGAAATGTTAAATGAAGGTGTATTTTTTGATGGTTCAT
CTATTGCTGGTTGGAAGGCAATTAACGAGTCTGACATGATTTTAATACCTGATACTTCTAGAATGATTATGGACCCTTTT
ACATCTCATAATACTCTAATCCTTTTTTGTGATATTTTAGATGCTGTTAAAAGATCTCCTTATGAGAGAGACCCAAGAGG
AACAGCTAAAAAGGCAGAAGCATATTTAAAAAAATCTGGCATTGGTGATAAAGCTTTTTTTGGTCCTGAACCTGAATTTT
TTGTTTTTGATGATGTTAGAATTAATAATGATCCAAACAACACTGGTTTTAAAATAGATAGTAAAGAAGGTCCTTATAAT
TCTGGAACAGAGTATGCAAATGGAAATATGGGTCATAGACCTCCAGTAAAAGGTGGTTACTTTCCAGTCCCTCCAGTTGA
TAGTGAACAAGATATGAGAGGTGAATACTTAAAAAGTTTAAAAGAGGTAGGTATTAAAGTTGAAAAACATCACCATGAAG
TAGCACCAAGTCAACATGAACTTGGTATGTACTTTGGAACACTTGTTGATCAAGCTGATAATGTTCAATTATATAAATAT
GTAGTTCAAATGGTTACACATTCATTTGGAAAAACAGCAACTTTTATGCCAAAGCCGATTGCAGGAGATAACGGTTCAGG
TATGCACATTCATCAATCAATTTGGAAAGACGACAAACCAGTTTTTTCTGGTGATGCTTATGCAGGGTTATCTGAAACAG
CACTTCACTATATTGGTGGAATTTTAAAACATGCAAAAGCAATTAATGCTTTTTCAAATGCTACAACAAATAGTTATAAA
AGATTAATTCCAGGTTTTGAAGCCCCTGTTCTGCTTGCTTACTCTGCAAGAAATAGATCTGCTTCATGTCGTATACCAAT
TTCATTAAGTAAAAATGGTGCAAGATGTGAAATAAGATTTCCTGATGCTTCAGGAAATCCATATTTAACTTTTGCTGCTA
TGCTTATGGCTGGTTTAGACGGAATTAAAAATAAAATACATCCAGGCGAATCTTTTGATAAAGATCTTTATGAATTACCT
CCCGAAGAAGTTAAAAACATTCCAACTGTTTGTGGATCATTAAGAGAAGCAATGGAAAGTTTAGATAAAGATAGAGAATT
TTTAACTGAAGGTGGTGTATTTACTGATGATCAAATTGATGCTTACATTGCATTAAAATTTGAAGAGATACATAGATTTG
AACACGCACCTCATCCTGTAGAGTTTGAGATGTATTACAGCAGCTAA

Protein sequence :
MTAANVLKFMKEKEVEFVDLRFTDPRGKLQHLTMDHTIVDEEMLNEGVFFDGSSIAGWKAINESDMILIPDTSRMIMDPF
TSHNTLILFCDILDAVKRSPYERDPRGTAKKAEAYLKKSGIGDKAFFGPEPEFFVFDDVRINNDPNNTGFKIDSKEGPYN
SGTEYANGNMGHRPPVKGGYFPVPPVDSEQDMRGEYLKSLKEVGIKVEKHHHEVAPSQHELGMYFGTLVDQADNVQLYKY
VVQMVTHSFGKTATFMPKPIAGDNGSGMHIHQSIWKDDKPVFSGDAYAGLSETALHYIGGILKHAKAINAFSNATTNSYK
RLIPGFEAPVLLAYSARNRSASCRIPISLSKNGARCEIRFPDASGNPYLTFAAMLMAGLDGIKNKIHPGESFDKDLYELP
PEEVKNIPTVCGSLREAMESLDKDREFLTEGGVFTDDQIDAYIALKFEEIHRFEHAPHPVEFEMYYSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-116 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_266169.1 glutamine synthetase VFG1399 Protein 2e-104 49