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Name : hsdM-1 (Psyc_0877) Accession : YP_264164.1 Strain : Psychrobacter arcticus 273-4 Genome accession: NC_007204 Putative virulence/resistance : Unknown Product : type I restriction-modification system, M subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : 2.1.1.72 Position : 1044227 - 1045816 bp Length : 1590 bp Strand : + Note : - DNA sequence : ATGGCTAAAACACCTGCAAATAAGAACGATCAAACCAAAGACGGTCGCTTTGAAGAAGCCCTTTGGGATGCTGCTAACAA GCTACGAGGTAGCGTCGAATCATCAGAATATAAGCACATTGTTTTAAGCCTGATTTTCTTAAAATTCATCAGCGATACTT TTGAGCAGCAGCGCCAAAAGCTTATTGATACAGGTTATGAAAAGCATATCGACATGGTGCAAGCCTATACCAAAGATAAC GTGTTCTATTTGCCAGCAGAGAGCCGTTGGAGCTTTATCCAGCAAAATGCCAAGCAAGAAGACATCGCCCTTAAAATCGA TACGGCGCTTAGCACGATTGAAAAGACCAACCAATCACTGAAAGGCGCATTGCCTGACAACTACTTCTCGCGTCTTGGTT TGACTGCCAGTAAGCTTGCCGCCTTGATTGATGTGGTGAATAACATCGATACCATTGGTAATCCAGAAGAAGACACCGTC GGGCGCGTGTATGAGTATTTCTTAGGCAAGTTTGCCGCGACTGAAGGTAAAGGCGGTGGTGAGTTCTATACGCCCAAATC TGTGGTCAATCTGATAGCAGAAATGGTTGAGCCGTATCAAGGCAAAATCTATGACCCATGCTGCGGCTCCGGCGGTATGT TCGTCCAGTCGATTAAGTTCATTGAGAGTCACCACGGCAATACCAAAGACGTGTCTATCTATGGGCAAGAGTACACCAGT ACCACTTATAAGCTTGCCAAGATGAACCTTGCCATTCGTGGTATCTCTAGCAACTTGGGTGATGTGGCTGCCGATACCTT CTTTAAAGATCAGCACGAAGACTTAAAAGCTGACTTCATCATGGCAAACCCCCCCTTTAACCAAAAGGATTGGCGTGCGT CTGATGAGCTGGTCGATGATCCACGCTGGGCAGGCTATCCGACACCGCCGACAGGTAATGCTAACTATGCTTGGATATTG CACATGATATCTAAGCTCTCTGAGCATGGTACAGCAGGTTTCGTACTGGCAAACGGTTCTATGTCTACCACTACCAGTGG TGAAGGTGAAATACGCCAGCAGATTATCGAAAACGATCTGGTCGATTGTATGATTGCGCTACCGGGTCAGCTATTTTATA CCACCCAAATACCGGTGTGCTTATGGTTCATCAATAAAGACAAACAAGCCAAGTCAGCAGATAGCAAAGCGCGTGGATTG CGTAATCGTAGCGGTGAGACGCTGTTTATTGATGCTCGCGCTATCGGCAGCATGATTAGCCGTACCAATAAAGAACTCAC GAAAGATGACATTGAAGCGATTGCCAAGACTTATCATGCATGGCGCGGTGAGAAAGAAGCGGGCGGCTATGAAGCTTATA CCGATGAAGCAGGCTACTGTAAATCTGCCACTCTAGACGATATGAAAGCCAATGATTATGTACTCACGCCTGGGCGCTAT GTCGGTGCTGCGGCAATAGAAGATGATGGCATATCGTTTGAGACTAAGATGTTAGAACTCAGCCAAACGCTATATGCACA GATGCAAGCGTCTGAAAAGCTAGATGCGACCATTCGTCAAAACTTGGAGGTGTTAGGTTATGGTGAGTGA Protein sequence : MAKTPANKNDQTKDGRFEEALWDAANKLRGSVESSEYKHIVLSLIFLKFISDTFEQQRQKLIDTGYEKHIDMVQAYTKDN VFYLPAESRWSFIQQNAKQEDIALKIDTALSTIEKTNQSLKGALPDNYFSRLGLTASKLAALIDVVNNIDTIGNPEEDTV GRVYEYFLGKFAATEGKGGGEFYTPKSVVNLIAEMVEPYQGKIYDPCCGSGGMFVQSIKFIESHHGNTKDVSIYGQEYTS TTYKLAKMNLAIRGISSNLGDVAADTFFKDQHEDLKADFIMANPPFNQKDWRASDELVDDPRWAGYPTPPTGNANYAWIL HMISKLSEHGTAGFVLANGSMSTTTSGEGEIRQQIIENDLVDCMIALPGQLFYTTQIPVCLWFINKDKQAKSADSKARGL RNRSGETLFIDARAIGSMISRTNKELTKDDIEAIAKTYHAWRGEKEAGGYEAYTDEAGYCKSATLDDMKANDYVLTPGRY VGAAAIEDDGISFETKMLELSQTLYAQMQASEKLDATIRQNLEVLGYGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hsdM | YP_251979.1 | type I restriction-modification system DNA methylase | Not tested | SCCmec | Protein | 3e-141 | 54 |
| hsdM | BAD24842.1 | HsdM protein | Not tested | Type-V SCCmec | Protein | 3e-141 | 54 |
| hsdM | BAH57701.1 | type I restriction-modification system DNA methylase | Not tested | Type-VII SCCmec | Protein | 6e-142 | 54 |
| api49 | CAF28523.1 | putative HsdM-like N-methyl transferase | Not tested | YAPI | Protein | 2e-112 | 45 |
