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Name : Psyc_0717 (Psyc_0717) Accession : YP_264010.1 Strain : Psychrobacter arcticus 273-4 Genome accession: NC_007204 Putative virulence/resistance : Unknown Product : bifunctional HTH-domain containing protein/aminotransferase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG0436 EC number : 2.6.1.- Position : 853728 - 855368 bp Length : 1641 bp Strand : - Note : in Corynebacterium glutamicum the aminotransferase can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; this protein contains a helix-turn-helix domain at the N-terminus DNA sequence : ATGATGGCTGATGACAAGACTAAAAGCACACAAGCTGAACGACTGGTACAGCTGCGCCGTGACAAAGGAATGACGGCAGA GCAGTTGGCACAAGCGATGACTGCTGCTGGCGCTAAAGTCAGTCGTGGTGCCATCTCTAATTGGGAGCGTGGGACGAATG GGATTGTCTCATCTAAGCTACCTACTCTCGCGCGTATTTTAGGCTGTAGCGAAGGATATTTATTGCGCGGTGAGCTTGAA AGTGACAGCAAATCAGATGTCGATTTAAAGAATATAGCGTCAGACAATACCAACGTATATGTCGAATCCGATGAGCAAGC TCATAGTGCCAGTCAAATCACACACACAACGACAATACCCTCTACTCCCCGCAAAATTTCACCAAATAACCTGATGAGTG GTCCCTTTATGAATACAATAAAAAAATCCGATAAATTACAAAACGTCTGCTACGACATTCGCGGTCCTCTGTTGCAAACT GCCAATAAAATGGAAGCAGAAGGCAAACGTATTTTAAAGCTGAATATTGGCAATCCCGCTCCTTTTGGTTTAGAAGCACC GCATGAGATTTTGCGTGATGTGGCGATGAATCTGCCGGAAGCGACGGGCTATTCAGACTCGCAAGGGATTTTTTCAGCGC GTAAAGCGGTATTGCAATACTATCAATCAAAAGGGCTTCTATCGGCAGTTGATGTTCGTGATGTTTACCTAGGTAATGGC GTCTCTGAGCTGATTGTCATGACCTTGCAGGCACTGATGAATGATGGCGATGAAGTATTGATTCCAATGCCAGACTACCC GCTTTGGACAGCAGCTACCAATCTAGCAGGCGGTACAGCGGTACATTATCGCTGTAATGAAGAAGACAACTGGCATCCTG ATATTGAAGACATCAAATCTAAAATCACTAGCAAAACCAAAGGCATTGTGGTTATTAATCCCAATAATCCGACAGGCGCA CTTTATAGTGATGAAGTACTGCTGCAAATTATCGAGGTCGCAAAAGAGCATGATTTAATTATTATGGCCGATGAAATTTA TGACCGTATTCTTTATGACGATATGGAACATACGCCGATGAGTACCTTGACCGATGAAGTACTGGTGTTGTCCTATAATG GTTTGTCAAAATCGCATCGCATCGCAGGCTTTCGTGCCGGTTGGATGATGATCTCAGGTCGCAAAGAACACGCCGCTGAC TTTATCGAAGGTTTGGATATGCTCGCCTCTATGCGTCTATGTTCTAACGTTCAAGGACAATATGCGATTCAGACAGCCAT GGGCGGCTATCAAAGCATGAAAGACTTAACTTCTAAAAAAGGTCGCTTGTACAAGCAGCGCGAGTTGGCAGTGACCCGCC TTAATGCGATCAAAGGTATTTCTTGTACCATGCCACAAGGCGCGTTTTACTGCTTTCCAAAGATGGATCCTGAGATTTAC CCTATCAAAGATGATATGCAGTTTATGATGGATTTATTGTTGGAAGAAAACGTATTGATGGTACAAGGAACAGGGTTTAA CTGGGACAAACATGACCATTTCCGCTTGGTATTTTTACCCAACTTACACGATTTAGAAGACGCCATGGATCGCTTAGACC GCTTCTTTGCTAAAAAGCGTAAGCAATTTGGTACCGACTAA Protein sequence : MMADDKTKSTQAERLVQLRRDKGMTAEQLAQAMTAAGAKVSRGAISNWERGTNGIVSSKLPTLARILGCSEGYLLRGELE SDSKSDVDLKNIASDNTNVYVESDEQAHSASQITHTTTIPSTPRKISPNNLMSGPFMNTIKKSDKLQNVCYDIRGPLLQT ANKMEAEGKRILKLNIGNPAPFGLEAPHEILRDVAMNLPEATGYSDSQGIFSARKAVLQYYQSKGLLSAVDVRDVYLGNG VSELIVMTLQALMNDGDEVLIPMPDYPLWTAATNLAGGTAVHYRCNEEDNWHPDIEDIKSKITSKTKGIVVINPNNPTGA LYSDEVLLQIIEVAKEHDLIIMADEIYDRILYDDMEHTPMSTLTDEVLVLSYNGLSKSHRIAGFRAGWMMISGRKEHAAD FIEGLDMLASMRLCSNVQGQYAIQTAMGGYQSMKDLTSKKGRLYKQRELAVTRLNAIKGISCTMPQGAFYCFPKMDPEIY PIKDDMQFMMDLLLEENVLMVQGTGFNWDKHDHFRLVFLPNLHDLEDAMDRLDRFFAKKRKQFGTD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aspC | YP_005682179.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 1e-114 | 61 |
| aspC | YP_005684271.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 1e-114 | 61 |
| aspC | YP_003784329.1 | aspartate aminotransferase | Not tested | PiCp 7 | Protein | 1e-114 | 61 |
| aspC | YP_005686363.1 | Aminotransferase AlaT | Not tested | PiCp 7 | Protein | 1e-114 | 61 |
