Gene Information

Name : Psyc_0651 (Psyc_0651)
Accession : YP_263944.1
Strain : Psychrobacter arcticus 273-4
Genome accession: NC_007204
Putative virulence/resistance : Virulence
Product : NAD-dependent epimerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0451
EC number : -
Position : 773340 - 774374 bp
Length : 1035 bp
Strand : +
Note : -

DNA sequence : 
ATGATACAGACACAGACAGTCTATGAACAAATTAAGCAAACACTGGCAAATGAGCCAAAAACATGGCTCATTACAGGGGT
TGCGGGTTTCATAGGATCTAATCTATTAGAAACTTTATTATTGCTAAATCAAAAAGTAGTGGGTTTAGATAATTTCGCGA
CTGGGTTTCAACATAATTTAGATGAAGTCCAAAGCTTAGTGAGCGCGCAACAATGGCAAGGCTTTACTTTTATAGAAGGT
GATATACGTAACTTAGCAGATTGCCAAGCGGCGTGTATTGGTATCGATTATGTCTTGCACCAAGCAGCGCTAGGTTCGGT
CCCACGCTCTATCGCTGATCCTATTAATACTAATGAGACTAATATTTCAGGCTTTTTAAATATGCTGACCGCAGCACGTG
ATGCAAAGGTCGCTAGCTTTACTTATGCGGCTAGTAGCTCAACGTATGGTGATCATCCTGCATTACCCAAGGTCGAGGAT
GCCATTGGTAAGCCTTTATCACCCTATGCAGTGACTAAATATGTCAATGAGCTATATGCCGATGTATTTGCTCGTACCTA
TGACTTCAATACGATTGGTCTACGTTATTTCAATATATTTGGCAAACGCCAAACGCCAGATGGTGCTTATGCCGCAGTGA
TACCTAAATGGACGGCGGCTATGATAGCTGGTGATGCGGTCTATATCAATGGTGATGGTGATACCAGTCGAGACTTTAAC
TTTATTGAGAATGCGGTACAAGCTAATATTTTGTCGGCGACTGCTACGGATGAAGCTAAAAACGAGGTGTATAACGTGGC
AGTGGGTGGTCGTACAACGCTCAATACACTATTTACGGCGCTACACGAGAATCTAGCCCTCAATGGGGTGAATTATACTC
AAGAAGCAGTATATCGAGATTTTAGAGCAGGAGATGTGCGTCATAGTCAGGCTGATATTAGTAAAATACAGAACGCATTA
GGCTATGCACCGCAGTTTGATATTGTTCAGGGTATTGAGAAAGCTATGCCTTGGTATGTTAAGTTTTTAGGTTGA

Protein sequence : 
MIQTQTVYEQIKQTLANEPKTWLITGVAGFIGSNLLETLLLLNQKVVGLDNFATGFQHNLDEVQSLVSAQQWQGFTFIEG
DIRNLADCQAACIGIDYVLHQAALGSVPRSIADPINTNETNISGFLNMLTAARDAKVASFTYAASSSTYGDHPALPKVED
AIGKPLSPYAVTKYVNELYADVFARTYDFNTIGLRYFNIFGKRQTPDGAYAAVIPKWTAAMIAGDAVYINGDGDTSRDFN
FIENAVQANILSATATDEAKNEVYNVAVGGRTTLNTLFTALHENLALNGVNYTQEAVYRDFRAGDVRHSQADISKIQNAL
GYAPQFDIVQGIEKAMPWYVKFLG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 1e-102 65
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 1e-102 65

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyc_0651 YP_263944.1 NAD-dependent epimerase VFG0430 Protein 6e-103 65