Gene Information

Name : Psyc_0650 (Psyc_0650)
Accession : YP_263943.1
Strain : Psychrobacter arcticus 273-4
Genome accession: NC_007204
Putative virulence/resistance : Virulence
Product : UDP-glucose/GDP-mannose dehydrogenase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0677
EC number : -
Position : 771887 - 773164 bp
Length : 1278 bp
Strand : +
Note : -

DNA sequence : 
ATGATGAATATTAGTAACATTAAAATAGCTGTGATTGGCCTTGGTTATGTGGGTTTACCACTCGCTGTTGAGTTTGGTAA
GAACCATTCAGTTATTGGTTTTGACATCAATAATGATCGTATTACTGAGCTAACGTCAGGTATGGAGCGTACGCTAGAAG
TTAGTAATGAGGAGCTAGCGCAAGCAGCGCATTTGAGTTATAGCTCTAATATCCAAGCGCTCAAAGACTGTAACTTTTTT
ATTGTGACCGTACCAACGCCTATTGATGAATACAAGCAACCAGATTTGACGCCATTAATTAAAGCTTCAGAATCTATCGG
CAGTCTACTCAAAAAAGACGATATTGTAGTTTATGAATCGACAGTTTATCCAGGTGCGACAGAAGAAGTCTGTATTCCAG
TATTAGAAAAAATCTCTGGTTTAGTTTTCAACCAAGATTTCTATGCAGGTTATAGTCCTGAACGTATCAATCCAGGCGAT
AAGGAGCATCGTGTTACTAATATTTTGAAAGTAACGGCAGGTTCCACTCCAGAGGTAGCCGACTTTGTCGATGAGGTATA
TAACCTAATCATCACTGCAGGTACTCATAAAGCACCAAGCATCAAAGTAGCAGAAGCGGCAAAAGTGATTGAAAATACCC
AAAGAGATGTCAATATTGCGCTAATCAATGAGTTAGCCGTTATCTTTAATAAGATGAATATAGATACCGAAGCGGTGTTA
GAAGCTGCAGGTACAAAATGGAACTTTTTGCCATTCCGCCCCGGACTAGTGGGTGGTCATTGTATCGGGGTAGATCCTTA
TTATTTGACTCATAAAGCACAGGCCATCGGCTATAATCCAGAAATTATACTAGCTGGTCGTCGCTTGAATGATAGCATGG
GCGAGTATGTGGTAACCCAACTGGTCAAAACCATGATCAAAAAGCGTATTCAAGTTGAAGGTGCCAAAGTTTTGATCTTA
GGGTTAAGCTTTAAAGAAAATTGTCCAGATGTGCGCAATACTAAAGTGATCGATATCGTACGTGAGCTAGAAGAATATAA
TATCGAAGTTGAGATTTATGACCCTTGGGTAAATAAAGCAGAAGCTGAGCGTGAGTATAATGTTACGCCTATCAGCAAGT
TAGCGATTAATACCTATGATGGTATCGTCTTAGCAGTCGCGCATAATGAGTTTGTAGAAATGGGTGTAGAGCAAATTAGA
TCGCTTGGTAAAACTAGCCATGTTCTCTATGATTTAAAGTATGTCTTTACTAAAGAAGATACTGATATCCGACTATAA

Protein sequence : 
MMNISNIKIAVIGLGYVGLPLAVEFGKNHSVIGFDINNDRITELTSGMERTLEVSNEELAQAAHLSYSSNIQALKDCNFF
IVTVPTPIDEYKQPDLTPLIKASESIGSLLKKDDIVVYESTVYPGATEEVCIPVLEKISGLVFNQDFYAGYSPERINPGD
KEHRVTNILKVTAGSTPEVADFVDEVYNLIITAGTHKAPSIKVAEAAKVIENTQRDVNIALINELAVIFNKMNIDTEAVL
EAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAQAIGYNPEIILAGRRLNDSMGEYVVTQLVKTMIKKRIQVEGAKVLIL
GLSFKENCPDVRNTKVIDIVRELEEYNIEVEIYDPWVNKAEAEREYNVTPISKLAINTYDGIVLAVAHNEFVEMGVEQIR
SLGKTSHVLYDLKYVFTKEDTDIRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-150 67
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 4e-150 67
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-115 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyc_0650 YP_263943.1 UDP-glucose/GDP-mannose dehydrogenase VFG0431 Protein 2e-150 67