Gene Information

Name : Psyc_0645 (Psyc_0645)
Accession : YP_263938.1
Strain : Psychrobacter arcticus 273-4
Genome accession: NC_007204
Putative virulence/resistance : Unknown
Product : IS30 family transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 765000 - 765902 bp
Length : 903 bp
Strand : +
Note : -

DNA sequence :
ATGCCCGCAGTGACAGTTGATGAAGTACGTCTTTATCAAAGAAACCAAAAAATATTTAGCATCACCTGTATGTGTCACGT
ATTAGATGTCAAGCCATCAAGCTACTACAACTGGATAAATCGTGGTATCAGTAATCAGCAGATTCGTCGCAATCAGTGTG
AGTTGCTGGTTCGCGTGGCTCATTATGAAACTAAACAGCGCTATGGCTGTGAGCGCTTGCATGCTCATCTTGCAGAGCAA
GGGCATCATATCAGTCAATACATGGTCAGAAGCATCAAAGAACAGTACGGTATTACTTGCCGTCGTCACAAACGTTTTAA
AATCACTACCAACTCTAATCATAATAAGCTCGTATATCCAAACCTGATCGATCAGAAGTTTGATACCAATCGTCCTAACG
AGTCGTGGGTTAGTGACATCACTTATATCTGGACAAATGAAGGTTGGCTATATTTGGCAGGCGTTAAAGACATCTATACT
AAAGAGCTGGTCGGCTATGCCATTAATAAGCGCATGACCACTGCTCTAGTATGCCGTGCACTCAATATGGCAATTAAGAA
TAAACGACCAAGCTCAAACCTGATTATTCACTCTGACAGAGGTAGTCAGTACTGTAGCCATGAGTACCATAAGATCATTA
AGCAGCATAAATTTAAGGGCTCGATGTCCAGACGTGGCAATTGCTTTGATAACGCGCCCATAGAAAGCTTCTCGGGTGAG
GAGCACTGCTCCGCAAGGAAGAATGAGTTGGTGTATCACCAAGACTATAAAACAAGATTCGAAGCCATTAGCGATATCAC
TAAATATATTGAACTAGATTACAACCAGACTAGGATTCAAAAGGGTTTAGGCTATAGAACGCCAAGACAGATGTGGTTTG
ACTTTTATCGTCAGGCTGCGTAA

Protein sequence :
MPAVTVDEVRLYQRNQKIFSITCMCHVLDVKPSSYYNWINRGISNQQIRRNQCELLVRVAHYETKQRYGCERLHAHLAEQ
GHHISQYMVRSIKEQYGITCRRHKRFKITTNSNHNKLVYPNLIDQKFDTNRPNESWVSDITYIWTNEGWLYLAGVKDIYT
KELVGYAINKRMTTALVCRALNMAIKNKRPSSNLIIHSDRGSQYCSHEYHKIIKQHKFKGSMSRRGNCFDNAPIESFSGE
EHCSARKNELVYHQDYKTRFEAISDITKYIELDYNQTRIQKGLGYRTPRQMWFDFYRQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 6e-53 47
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 8e-53 47
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 3e-53 47
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 3e-53 47
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 7e-53 46
unnamed AAF09030.1 unknown Not tested SHI-O Protein 7e-53 46
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 7e-53 46
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 6e-53 46
unnamed AAF09022.1 unknown Not tested SHI-O Protein 5e-52 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyc_0645 YP_263938.1 IS30 family transposase VFG1706 Protein 3e-53 47