Gene Information

Name : hom (Psyc_0253)
Accession : YP_263557.1
Strain : Psychrobacter arcticus 273-4
Genome accession: NC_007204
Putative virulence/resistance : Unknown
Product : homoserine dehydrogenase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0460
EC number : 1.1.1.3
Position : 303315 - 304661 bp
Length : 1347 bp
Strand : -
Note : catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine

DNA sequence :
GTGAGCAAATCCATCAAACTAGCGATACTTGGTTTAGGCACCGTCGGAACGGGTGTGGTCAATCTAATCAATGATAATTT
AGATGAACTAAAACGTCGTAGCGGACGCGACATTGTGATTACCGAAGTTGGTATTCGTCGTCAGCGTGATGATATCGATC
CTAATATTATACAAAACAGCGATTTGATGGCAACCGCTGCCAGTGACAATGTCGATATTGTCATCGAGTTGATTGGCGGT
ACGACCCTTGCCAAAGACGTTGTTATGCACGCCATCAAAAACGGCAAGCATGTCGTAACGGCCAACAAAGCGCTACTGGC
TGAGCATGGCAACGAGATTTTTGCCTTTGCTGAACAGCATAACGTCCATGTCGCCTATGAAGCAGCCGTAGCAGGTGGTA
TTCCGATTATTAAAGTCATGCGTGAAGGCTTAGCCGCCAATAAAATTGATTGGCTAGCAGGCATTATTAATGGTACGGGC
AACTTTATTATGACGGAGATGCGCGATAAAGGTCGCCCATTTGCCGATGTATTGAGCGAGGCGCAAGCACTTGGTTATGC
TGAAGCAGATCCTACCTTTGATGTCGAAGGTATCGATGCGGCGCACAAACTGGCGCTACTTGCCTCTATTGCTTTTGGTA
TTCCACTACAGTTTGATAAAGTCTACTGTGAAGGCATCACCGGTATTACTTTGCAGGATGTCAATTACGCCGAAGAGCTT
GGCTATCGCATCAAGCATTTAGGCTTCGCTGTTCGCCGTGCGGGCAATGGCAGCGGTGACGACAGCGCCGGTATTGAGCT
GCGTGTACACCCAACGCTGATTCCACAAAACGCCCTGCTTGCCAACGTTAATGGCGTAAAAAATGCCGTATTGGTGAACT
CCCATCCTCTCGGTCAGACGTTATATTGTGGTGATGGCGCGGGTGCGGGTGCGACAGCTTCTGCAGTGATGGCAGATGTC
ATGGATTTAGTGCGTGTTTTAGGATGCAAAGATGCTGACCAACAAAACAGCAATGGTCATCATGTGCCGCACTTAGCCTT
TATCCCTGAAAAATTGTCAGATACGCCGATATTGCGTGCTGAACAGATGATTACCGGATACTATTTACGGGTACATGCGT
ACGATAGTCCTGGCGTATTGGCAGACATCACCCGTATCTTGAGTGATGCCGGTATCAATATCGATGCTATTTTACAAAAA
CCTGCGCATAAGCTTGGGCAAGTGCCGGTGATTATCTTAACGCTGCCTGTGGTTGAGAGTCAGATGAATCTTGCCATCGA
AAAAATCGAGAAATTAGATACCATTACTGATAAAGTGGTACGCATACGCTTAGATGAGCTGGCGTAG

Protein sequence :
MSKSIKLAILGLGTVGTGVVNLINDNLDELKRRSGRDIVITEVGIRRQRDDIDPNIIQNSDLMATAASDNVDIVIELIGG
TTLAKDVVMHAIKNGKHVVTANKALLAEHGNEIFAFAEQHNVHVAYEAAVAGGIPIIKVMREGLAANKIDWLAGIINGTG
NFIMTEMRDKGRPFADVLSEAQALGYAEADPTFDVEGIDAAHKLALLASIAFGIPLQFDKVYCEGITGITLQDVNYAEEL
GYRIKHLGFAVRRAGNGSGDDSAGIELRVHPTLIPQNALLANVNGVKNAVLVNSHPLGQTLYCGDGAGAGATASAVMADV
MDLVRVLGCKDADQQNSNGHHVPHLAFIPEKLSDTPILRAEQMITGYYLRVHAYDSPGVLADITRILSDAGINIDAILQK
PAHKLGQVPVIILTLPVVESQMNLAIEKIEKLDTITDKVVRIRLDELA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00305 YP_008207770.1 Homoserine dehydrogenase Not tested AbaR25 Protein 3e-114 63
BJAB0868_00309 YP_008211635.1 Homoserine dehydrogenase Not tested AbaR26 Protein 3e-114 63