Gene Information

Name : Psyc_2114 (Psyc_2114)
Accession : YP_265395.1
Strain : Psychrobacter arcticus 273-4
Genome accession: NC_007204
Putative virulence/resistance : Resistance
Product : efflux ABC transporter ATPase subunit
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2611841 - 2612530 bp
Length : 690 bp
Strand : +
Note : -

DNA sequence :
ATGACATCAGCATTACCTACCTCAAAAGCAGTGCTGCTCACTGCCACTAAGTTAAATAAGACCGTACACGTTGGCGACCA
GTCCTTATCTATTATTAAAGACGTCGATATTCATGTCAATGCTGGCGAGTTTGTGGTGATCATGGGTAAATCTGGTTCTG
GAAAATCCACTTTGCTGGGTTTATTAGCGGCGTTAGATTATCCGGATAGCGGCGACGTTGAGCTCGCAGGTCAAACCTTA
AGCCGATTAAATGAAGATGCTTTAGCGGTTATTCGGCAGCGCGATATGGGTTTTGTGTTTCAGTCCTTTCATCTGCTACC
AACGCTAACCGTTGCTGAAAATATCGCTTTTCCGTTGGATATCGCCCGTCGCCCAGATGCGGCGCGCGTTGATGAATTGA
TTGAGGCAGTTGATTTGGGTCATAGGCGTCATAGCTTGCCAAACCAGTTATCAGGTGGCGAGCAACAGCGTACGGCGGTT
GCTCGCGCATTGGTATCACGCCCAAAGATTGTCTTTGCTGATGAGCCTACCGGTAATTTAGATGAACAAAACGCCAATCA
AGTCATGCAGCTATTACTGGATTTGCGTCAGAAAACCGGCTCGGCGCTGGTGGTGGTCACCCATGATTCAGCACTTGCTG
ATATGGCAGATCGCGTTATTACCATGCATGACGGACGGATTGTATCGTAA

Protein sequence :
MTSALPTSKAVLLTATKLNKTVHVGDQSLSIIKDVDIHVNAGEFVVIMGKSGSGKSTLLGLLAALDYPDSGDVELAGQTL
SRLNEDALAVIRQRDMGFVFQSFHLLPTLTVAENIAFPLDIARRPDAARVDELIEAVDLGHRRHSLPNQLSGGEQQRTAV
ARALVSRPKIVFADEPTGNLDEQNANQVMQLLLDLRQKTGSALVVVTHDSALADMADRVITMHDGRIVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-30 46
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 45
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 45
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 45
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-26 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyc_2114 YP_265395.1 efflux ABC transporter ATPase subunit NC_012469.1.7686878. Protein 5e-38 46
Psyc_2114 YP_265395.1 efflux ABC transporter ATPase subunit NC_008702.1.4606598. Protein 9e-31 46
Psyc_2114 YP_265395.1 efflux ABC transporter ATPase subunit CP001581.1.gene798.p Protein 5e-38 45
Psyc_2114 YP_265395.1 efflux ABC transporter ATPase subunit NC_012469.1.7685735. Protein 7e-32 42