|
Name : murD (Psyc_2040) Accession : YP_265321.1 Strain : Psychrobacter arcticus 273-4 Genome accession: NC_007204 Putative virulence/resistance : Unknown Product : UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG0771 EC number : 6.3.2.9 Position : 2508808 - 2510238 bp Length : 1431 bp Strand : - Note : UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation DNA sequence : ATGACCGCTAGCACCGCAACAGAAACCTTACTTCATAAAGGCAGTGGCTTACAAGTCGTGGTCGGTTTGGGGCAGTCGGG ATTATCGGTCGCACATTATTTGGCTGAGCAGGGCTACCAAGTTGCCGTCACTGACAATCAGGAGAATCCCGCATTAGCAG ATAAACTGCCTGCTACTATTGATATCAGACAGTTTGGTGCGATCGATGCAGAGTTATTACAACAAGCGGCACGGATTATA ATCAGTCCTGGTATCTCTCTAGATAATGATGCGATTGCAGCGGCGCGTGCGGCAAATATTCCAGTGGTCAGCGATATTCA GCTATTTTGTGAAGCTTGTACGGTGCCAATTGTTGCGATTACTGGCTCAAATGCAAAAAGCACTGTGACCACGCTGGTTG GACAAATGGCGGCAGATGCTGGTATCAATGTTGGCGTAGGCGGTAATATTGGCGTGCCAGCGCTGAGCCTTTTGAGTAAT GATAAAATGGAGCTAGCAGTTATAGAATTATCTAGCTTTCAGTTAGAAACCGTGACCAACTTAGGGGCGCAGGTCGCAAC AGTCCTCAATATGTCGCCTGATCATTTAGACCGTCATGGTGATATGCTCGGCTATCACCAAGCCAAACATCGTATCTTCC AAGGTGCCAAATCGGTAGTGATTAATCGTGAAGATGCGTTGACCCGACCATTGGTGTCAGATAGTTTGCCGCGACTGAGC ACTGGTATTCATGCTCCTAACAAGGGGCACTATGGGCTTATTACGGATGCAGCAGGGCAGACTTATTTGGCACGTGGTAC AGAGCGTCTCATATCAGCAGATAAACTAAAGATAAAAGGTCGTCATAACTTACTTAATGCCCAAGCAGCATTGGCATTGG GCGAGCTTGCTGGTTTGCCGCTTGAGAGTATGCTTAGCACCTTGCAGCAGTTTGCAGGTCTTGAGCATCGCTGCCAATAT GTCGCCACAATTGCTGGCATTGATTACTTTAATGATTCTAAAGGCACCAATATTGGCTCAACCATGGCGGCTGTTGAAGG TTTGGGCGCGGTCTATGCACCCAAAGACGGTAAGTTATTATTAATATTGGGCGGTCAAGGTAAAGCTCAGCAGTTCGGTG AACTCTCGCCTTTTATCAATCAATATGTGAGTCAAGTGCTCTTTATTGGCGAGGACAGTCAGCAGATTGAACAGCATTTA CGCGCAGCGGGTCTCAGCGATGAGGTTAGCCTGCATCAATGTCAGACCTTAGAAAATGCTTTTTCGATGATTGAGCAAGT AACGGCAAGTAGTTTGTCGCAAGTACAGGCGGTATTATTGTCACCTGCTTGTGCAAGCTTCGATCAGTTTAATGGGTTTG TCGCGCGGGGCGAGCGCTTTAGCCAGCTCGTTAAACAGTTGAATACCGTGTCTCAACAGGCACTATCATAA Protein sequence : MTASTATETLLHKGSGLQVVVGLGQSGLSVAHYLAEQGYQVAVTDNQENPALADKLPATIDIRQFGAIDAELLQQAARII ISPGISLDNDAIAAARAANIPVVSDIQLFCEACTVPIVAITGSNAKSTVTTLVGQMAADAGINVGVGGNIGVPALSLLSN DKMELAVIELSSFQLETVTNLGAQVATVLNMSPDHLDRHGDMLGYHQAKHRIFQGAKSVVINREDALTRPLVSDSLPRLS TGIHAPNKGHYGLITDAAGQTYLARGTERLISADKLKIKGRHNLLNAQAALALGELAGLPLESMLSTLQQFAGLEHRCQY VATIAGIDYFNDSKGTNIGSTMAAVEGLGAVYAPKDGKLLLILGGQGKAQQFGELSPFINQYVSQVLFIGEDSQQIEQHL RAAGLSDEVSLHQCQTLENAFSMIEQVTASSLSQVQAVLLSPACASFDQFNGFVARGERFSQLVKQLNTVSQQALS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00311 | YP_008207776.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR25 | Protein | 2e-80 | 56 |
| BJAB0868_00315 | YP_008211641.1 | UDP-N-acetylmuramoylalanine-D-glutamate ligase | Not tested | AbaR26 | Protein | 2e-80 | 56 |
