|
Name : Psyc_0180 (Psyc_0180) Accession : YP_263487.1 Strain : Psychrobacter arcticus 273-4 Genome accession: NC_007204 Putative virulence/resistance : Unknown Product : AMP-dependent synthetase/ligase Function : - COG functional category : I : Lipid transport and metabolism COG ID : COG0318 EC number : - Position : 208866 - 210530 bp Length : 1665 bp Strand : - Note : The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases. DNA sequence : ATGACCGACTTTCACACAGGTCTCGGCAAAAATGCTGCTAACCATCAACCGCTTACCCCTATTGACTTCATCATTCGTAG CGCTCAGGTCTATCCTGACAGAACGGCTATCATCTATGACGACCTAGAACATAATAATCTCACGCAAACGTGGCAACAGA CTTACGATCGTTGCAGACAACTGGCTGATGGTCTACGTAAATTGGGTGTTGATAAAAATGACACGGTTGCGGTCATGATG CCGAATACGCCAGCAATGGTCGAATGTGCCTTTGGGGTGCCCATGTCAGGTGGCGTGCTATGTACGTTAAACACTCGTCT CGATATCAATGCGCTCAGCTTTTGCTTACAACACTCAGAAGCCAAAGTATTGATTTTAGACAGCGAGTTTGCTGAGCATG CTGAGATGATCGACGAAACGTTTCCCAACCTTATCGTTATTCATGCGACAGATGCAGCGGTCGATATCGAGCGTTTTGGA CAAATGAGTTATGAAGAATTAATCGCCAGCGCTGATAGTTTGGATAATTGGGAAAAACCAACAGATGAATGGGATGCAAT TGCTCTGAACTATACGTCTGGCACCACTGGTAAGCCCAAAGGTGTGGTTTATCATCACCGCGGTGCGACACTTAATGCCG TGTCCAATATTTTAGATTGGGATATGCCAAAGCACCCAATGTATCTATGGACGCTGCCATTATTTCATTGTAATGGTTGG TGTTTTCCTTGGACGATCGCTGAGCGAGCTGGTGTCAACGTCTGCTTGCGCAAGATTGACGCTGATTTGATTTTGCAGCT GATTGCCAAACATAAAGTCTCACATTATTGCTCAGCGCCTGTGGTGCATAATATGATTGCCGGTGGCAAGCCTGAATACA AAGAAGCCATCAATCATGAAGTTAAGGGCTGGGTCGCTGGTGCGCCGCCGTCTGAAACCATGCTGGCAGCCATGGAAGCC ATGGGCTTTCATATCTCTCATGTTTATGGTCTCACCGAAGTTTACGGACCTGTCACCATCTGCGCTGAGCAACAAGAATG GGCTACGCTTGATGTCGCTGGGCGCGCGCAGAAAAAATCACGTCAAGGCGTGACCTCACATTTGATGAGCGGATTTGAGC TGTTTAAACAAGGTACCACTGAACCGGTTGCCGCTGATGGTAAAGAAATGGGCGAGCTGGCACTGCGCGGCAATATGGTG ATGAAAGGTTATCTAAAAAGCCGTAAGGCCACCGAAGAAGCCTTTACTGATGGTTGGTTCCGCACCGGTGATTTGGGTGT TAAATATCCTGACGGCTATATCAAAATCATGGACAGGCTTAAAGACATCATCATCTCAGGTGGCGAAAACATCTCTAGTA TCGAAGTCGAAAACGTCCTATATAAAATGCCAGAAATCCAAAGCTGTGCTGTAGTCGCTGCGCCGCATGATAAATGGGGT GAAGTACCGGTGGCATTTATCGAGATTCATGCTGGCAGCACTTTACAGCGCGATAATGTGATGGCGCATTGTAAACAGCA CCTTGCTAGTTTTAAAATGCCTAAATATATTATTTTTGCTGAAATCCCAAAGACCAGCACCGGTAAGGTACAAAAGTTTG AACTGCGCCAAGCGGCCAAATCCTTGGCACACGAAACGCCTAAAGTAACGGCAAGTGCCAAGTAG Protein sequence : MTDFHTGLGKNAANHQPLTPIDFIIRSAQVYPDRTAIIYDDLEHNNLTQTWQQTYDRCRQLADGLRKLGVDKNDTVAVMM PNTPAMVECAFGVPMSGGVLCTLNTRLDINALSFCLQHSEAKVLILDSEFAEHAEMIDETFPNLIVIHATDAAVDIERFG QMSYEELIASADSLDNWEKPTDEWDAIALNYTSGTTGKPKGVVYHHRGATLNAVSNILDWDMPKHPMYLWTLPLFHCNGW CFPWTIAERAGVNVCLRKIDADLILQLIAKHKVSHYCSAPVVHNMIAGGKPEYKEAINHEVKGWVAGAPPSETMLAAMEA MGFHISHVYGLTEVYGPVTICAEQQEWATLDVAGRAQKKSRQGVTSHLMSGFELFKQGTTEPVAADGKEMGELALRGNMV MKGYLKSRKATEEAFTDGWFRTGDLGVKYPDGYIKIMDRLKDIIISGGENISSIEVENVLYKMPEIQSCAVVAAPHDKWG EVPVAFIEIHAGSTLQRDNVMAHCKQHLASFKMPKYIIFAEIPKTSTGKVQKFELRQAAKSLAHETPKVTASAK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAK01500.1 | AMP-binding protein domain | Not tested | PAGI-1 | Protein | 4e-103 | 45 |
