Gene Information

Name : Psyc_1612 (Psyc_1612)
Accession : YP_264894.1
Strain : Psychrobacter arcticus 273-4
Genome accession: NC_007204
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 1991704 - 1993230 bp
Length : 1527 bp
Strand : +
Note : Chloroacetaldehyde is a possible substrate

DNA sequence :
ATGTTATACGCTTATCCCAATACTGAAAACAGTCCCGTCCAATTCCGCAAAAAGTATGACAACTTTATCAATGGTGAGTG
GGTCGCGCCAATCGATGGCGAATACTTTGACAACTCAAGTCCAATCGACGGTAAAACCTTCTGTCAGATCGCGCGCTCAA
AAGAAGCAGATGTTGAAGCTGCGCTAGATGCCGCTCATGCCGCCAAAGATGCATGGGGCAAAACCAGTGTCACTGAACGC
TCTAATATGTTGCTCAAACTTGCCGACGGTATCGAAGCCAATCTCGAAAAAATCGCCATCGCCGAGAGTTATGAAAACGG
TAAACCAGTTCGCGAAACCCTTGCCGCTGATATTCCAATCGCCATCGACCATTTGCGTTACTTCGCTGGCGTGATCCGTG
CTCAAGAAGGCGGCATTAGCCAAATTGATGAAGATACAGTCGCCTATCATTTTCATGAACCTCTAGGTGTCGTCGGTCAA
ATTATTCCTTGGAACTTCCCTATTCTAATGGCGATTTGGAAAATTGCCCCTGCTCTTGCAGCTGGTAACTGCGTCGTCCT
CAAGCCTGCCGAGCAAACCCCTGCTTCTATTTTGTACATGCTTGATGTAATAGGCGCAGCGGACATTCTACCGAAAGGCG
TATTAAACGTCGTTAACGGCTTCGGTGTTGAAGCTGGTAAGCCACTCGCTTCTAATCCACGTATTGATAAAGTTTCCTTT
ACTGGTGAAACCACCACTGGTCGCTTAATCATGCAATACGCCAGTGAAAATATCATTCCAGTAACGCTAGAGCTGGGTGG
CAAAAGTCCAAACATCTTCTTTGCCGATGTCATGGATGAAGACGATGACTTCTTAGATAAAGCAGTCGAAGGCTTGGTCA
TGTTTGCGCTGAACCAAGGCGAAGTCTGTACTTGCCCATCACGCGCCCTCGTTCACGAAAGCATATATGATGAATTTATG
AAACGCTGTATCGCCCGCGTTAAAGCCATCAAAATGGGCAACCCGCTCGATACCGATACCATGATCGGCGCCCAAGCCAG
CTCAGATCAGTTAGAAAAAATCCTATCTTATCTAGATATCGGTAAGAAAGAAGGCGCGAAAGTCCTTGTGGGTGGTGAAC
TTGCCAAACATGATGGCGATATAGCAAACGGTTATTATGTGCAGCCGACTATCTTTGAAGGCACCAATGATATGCGCGTG
TTCCAAGAAGAAATCTTTGGTCCTGTGCTTGCCGTCACTACTTTTAAAGACGATGAAGAAGCAATGGCTCTCGCCAATGA
TACCTTATACGGTCTTGGTGCTGGTGTATGGACGCGTAATGGTACTCGTGCTTATCGTTTCGGTCGTGGCATTAAAGCTG
GTCGCGTGTGGACCAACTGCTATCACCTCTATCCTGCGCATTCTGCGTTTGGCGGTTATAAGCAGTCTGGTATCGGTCGT
GAAAACCATCTGATGATGCTTGATCATTATCAGCAAACCAAAAACATGCTGGTGTCATATAGTCCTAAAGCGATGGGCTT
CTTTTAA

Protein sequence :
MLYAYPNTENSPVQFRKKYDNFINGEWVAPIDGEYFDNSSPIDGKTFCQIARSKEADVEAALDAAHAAKDAWGKTSVTER
SNMLLKLADGIEANLEKIAIAESYENGKPVRETLAADIPIAIDHLRYFAGVIRAQEGGISQIDEDTVAYHFHEPLGVVGQ
IIPWNFPILMAIWKIAPALAAGNCVVLKPAEQTPASILYMLDVIGAADILPKGVLNVVNGFGVEAGKPLASNPRIDKVSF
TGETTTGRLIMQYASENIIPVTLELGGKSPNIFFADVMDEDDDFLDKAVEGLVMFALNQGEVCTCPSRALVHESIYDEFM
KRCIARVKAIKMGNPLDTDTMIGAQASSDQLEKILSYLDIGKKEGAKVLVGGELAKHDGDIANGYYVQPTIFEGTNDMRV
FQEEIFGPVLAVTTFKDDEEAMALANDTLYGLGAGVWTRNGTRAYRFGRGIKAGRVWTNCYHLYPAHSAFGGYKQSGIGR
ENHLMMLDHYQQTKNMLVSYSPKAMGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aldA ACK75585.1 aldehyde dehydrogenase Not tested VPI Protein 5e-102 61
aldA ACK75593.1 aldehyde dehydrogenase Not tested VPI Protein 5e-102 61
aldA ACK75574.1 aldehyde dehydrogenase Not tested VPI Protein 2e-102 61
aldA ACK75590.1 aldehyde dehydrogenase Not tested VPI Protein 2e-102 61
aldA ACK75596.1 aldehyde dehydrogenase Not tested VPI Protein 2e-102 61
aldA ACK75577.1 aldehyde dehydrogenase Not tested VPI Protein 1e-102 61
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 5e-153 61
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 5e-153 61
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 5e-153 61
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-143 61
aldA ACK75582.1 aldehyde dehydrogenase Not tested VPI Protein 2e-102 61
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-152 61
aldA ACK75588.1 aldehyde dehydrogenase Not tested VPI Protein 2e-101 60

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyc_1612 YP_264894.1 aldehyde dehydrogenase VFG0082 Protein 1e-143 61