Gene Information

Name : Psyc_1596 (Psyc_1596)
Accession : YP_264878.1
Strain : Psychrobacter arcticus 273-4
Genome accession: NC_007204
Putative virulence/resistance : Virulence
Product : two component heavy metal response transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1951340 - 1952056 bp
Length : 717 bp
Strand : +
Note : adjacent protein is histidine kinase

DNA sequence : 
ATGAAGGTGCTGTTAGTAGAAGACGAACAAAAACTTGGAGAATATATAAAAAAAGGCTTAACTGAGACCGGCTTTATCGT
GGATCATCACATGACTGGTTTAGATGGTTATCATGCATTAATGACTGAAGAATTTAGTGTGGTGCTGATGGATGTGATGC
TACCTGACGTCAGTGGCTTTGAGCTGGTACAGCGCTACCGTGCCGCTGGGAAGCATACGCCTGTTTTGTTTTTAACAGCT
AAAGATGATTTAAGCGATCGGATTAAAGGTATTGAAATTGGTGGCGATGATTATCTAACCAAGCCTTTTGCTTTTGCTGA
GCTGATTGTCAGAATAAAAAACCTGTTACGCCGTGCCAATCAATCGGACTATAAAAGCACGGTCATACATATAGCTGATC
TAAAAATGGATATTGCCAAACGCACCGTCTATAGAGGTGAAACCCCCATCAAATTGACTGCCAAAGAGTTTACTTTATTA
CAGCTTTTCTTAGAACGTCAAGGTGAGGTACTGCCACGAACTGTGATTGCCTCGCAAGTATGGGATATAAACTTTGACAG
TGATACGAATATCATTGACGTTGCTATAAGACGTTTACGGATCAAAATCGACGACGGCTTTGATATAAAGCTGATTCACA
CGGTACGCGGGATGGGCTACAGGTTAGAGAACAGTAGCATGGGCGACGATGGCATTAACAAAGACGATCTGATATAA

Protein sequence : 
MKVLLVEDEQKLGEYIKKGLTETGFIVDHHMTGLDGYHALMTEEFSVVLMDVMLPDVSGFELVQRYRAAGKHTPVLFLTA
KDDLSDRIKGIEIGGDDYLTKPFAFAELIVRIKNLLRRANQSDYKSTVIHIADLKMDIAKRTVYRGETPIKLTAKEFTLL
QLFLERQGEVLPRTVIASQVWDINFDSDTNIIDVAIRRLRIKIDDGFDIKLIHTVRGMGYRLENSSMGDDGINKDDLI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 3e-55 51
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 8e-54 50

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyc_1596 YP_264878.1 two component heavy metal response transcriptional regulator BAC0111 Protein 3e-63 58
Psyc_1596 YP_264878.1 two component heavy metal response transcriptional regulator BAC0197 Protein 3e-61 55
Psyc_1596 YP_264878.1 two component heavy metal response transcriptional regulator BAC0125 Protein 4e-59 55
Psyc_1596 YP_264878.1 two component heavy metal response transcriptional regulator BAC0083 Protein 2e-62 54
Psyc_1596 YP_264878.1 two component heavy metal response transcriptional regulator BAC0347 Protein 3e-57 54
Psyc_1596 YP_264878.1 two component heavy metal response transcriptional regulator BAC0308 Protein 2e-57 54
Psyc_1596 YP_264878.1 two component heavy metal response transcriptional regulator BAC0638 Protein 6e-56 53

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyc_1596 YP_264878.1 two component heavy metal response transcriptional regulator VFG0596 Protein 1e-55 51