Gene Information

Name : Psyc_0016 (Psyc_0016)
Accession : YP_263324.1
Strain : Psychrobacter arcticus 273-4
Genome accession: NC_007204
Putative virulence/resistance : Unknown
Product : IS3/IS911 family transposase OrfA
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2963
EC number : -
Position : 20634 - 20930 bp
Length : 297 bp
Strand : +
Note : -

DNA sequence :
ATGACCAAGAAAATCAGAACCTATAGTGCAGAATTCAAAGCAGAAGCCGTCAAGAAGATAGCGGACAACGATGGGAATAT
TTCAGCGACTGCAAAGCAGCTTGGTATCGCCATGCAGACCTTATCTAATTGGCACAATAAAGCCAATCAAGGCAAACTTG
AGGGAACAGCTCAATATGATCCTGAACTCATAGCAGTGATCGAAGAAAACAAACGCCTCAAACGACAGCTTAAAGTTGCC
GAGGAGGAACGAGAGATCCTAAAAAAGGCGACGGCGTACTTTGCAAGGCACAGTTAG

Protein sequence :
MTKKIRTYSAEFKAEAVKKIADNDGNISATAKQLGIAMQTLSNWHNKANQGKLEGTAQYDPELIAVIEENKRLKRQLKVA
EEEREILKKATAYFARHS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-10 41
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 2e-10 41
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 1e-10 41
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 1e-10 41
unnamed AAF09021.1 unknown Not tested SHI-O Protein 6e-11 41
unnamed AAF09029.1 unknown Not tested SHI-O Protein 6e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Psyc_0016 YP_263324.1 IS3/IS911 family transposase OrfA VFG1707 Protein 9e-11 41