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Name : Psyc_1374 (Psyc_1374) Accession : YP_264656.1 Strain : Psychrobacter arcticus 273-4 Genome accession: NC_007204 Putative virulence/resistance : Unknown Product : patatin-related protein Function : - COG functional category : R : General function prediction only COG ID : COG3621 EC number : - Position : 1658537 - 1659637 bp Length : 1101 bp Strand : - Note : Patatin is a phospholipase. DNA sequence : ATGGCAACACTAGAAAAAACTGAGCCAGTGGATGGACTTTTAGAAATCTCAGAACCAATTAAAATTTTAGCGTTAAATGG TGGGGGTGTACGCGGGCTATTTACTATTACGTTGCTTGCCGAACTTGAATCAATCATTGAAAAGCGTGAAAAACGTGAAA ATGTCAAAATTGGTGACTACTTTGACCTGATTACCGGTACATCTATTGGTGGTGTTTTGGCACTTGGATTGGCAAGTGGT AAAAGTGCGCGAGAACTAAAGGAAGTATTTGAAAAAAGTGCACCTGATATTTTCCCTGTAGGACGTTTCAGATTCAAGAA ATTGATCACACTATTTTATCCAATCTACAGAAGTGATCCTTTATACGAGACTGTGAAAAGTATGATCGGTGACAATATCA AGTTCGATGACCTTGAGCGCCGAGTAATGATTACGTCATTGAACCTTTCCACTGGTAAACCAAAATTTTTCAAAACACCA CATAATCCCATGTTTACGTTTGATGGCGAAATCAAATTGATTGATGCGGCAATGGCTACATCAGCTGCACCAACCTATTT TAAACCACATTTCATTAGTAAACTGAATCACTATTTCGTTGATGGTGGATTAGTTTCTAATAACCCTAGTTTTATAGGTG TTCGTGAAGTCTTGATAGATATGAAAGATGACTTCCCGAATGCAGAGCCTAAAGATGTGAAAATTCTGAATATTGGTACT TTGAGCGAGAATTACTGTATTGGTCCCAAGACGTTATCTAAAAAATGCTCGAAGGGTTACTTAGGATTATGGGGAATGGG GGAGCGTCTTGTTTTAATTACTATGACTGCTAACCAACACTTACAGCGTTTTATGTTGCTACGGGAACTAAAAGTGCTTG GTATTTCCAATAATTACGTTGAAATTGATGAAACCATTCCAAACGAAGCGTCCTCTGACATTACTTTAGATAATGCATCC CAGAGTAGCTTAAATGCCTTAAAAGGTATGGGAAAAAAATTGGGTGCTGAGAGATACAGCGAAGTTAAAGAATTACGCGA TTTCTTCTTAAAAACAGCGAAACCGTTTGTCAAATCTCATAGTAATGGAGCATCAGCATGA Protein sequence : MATLEKTEPVDGLLEISEPIKILALNGGGVRGLFTITLLAELESIIEKREKRENVKIGDYFDLITGTSIGGVLALGLASG KSARELKEVFEKSAPDIFPVGRFRFKKLITLFYPIYRSDPLYETVKSMIGDNIKFDDLERRVMITSLNLSTGKPKFFKTP HNPMFTFDGEIKLIDAAMATSAAPTYFKPHFISKLNHYFVDGGLVSNNPSFIGVREVLIDMKDDFPNAEPKDVKILNIGT LSENYCIGPKTLSKKCSKGYLGLWGMGERLVLITMTANQHLQRFMLLRELKVLGISNNYVEIDETIPNEASSDITLDNAS QSSLNALKGMGKKLGAERYSEVKELRDFFLKTAKPFVKSHSNGASA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0178 | NP_229835.1 | patatin-like protein | Not tested | VSP-1 | Protein | 8e-88 | 58 |
| unnamed | AAP70299.1 | VC0178-like protein | Not tested | HPI | Protein | 4e-96 | 58 |
