Gene Information

Name : glnA (Psyc_0975)
Accession : YP_264262.1
Strain : Psychrobacter arcticus 273-4
Genome accession: NC_007204
Putative virulence/resistance : Virulence
Product : L-glutamine synthetase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG0174
EC number : 6.3.1.2
Position : 1169917 - 1171326 bp
Length : 1410 bp
Strand : +
Note : Contains adenylation site

DNA sequence :
ATGTCAAATAAACTACTTGATCTGATCAAATCATCCAACGCTAAATGGGTCGATTTTCGCTTCACTGATACCCGCGGTAA
AGAGCATCATATGAGCTTTCCAGCTCATAGCGTTGATGAAGAATCGATGGAAGATGGCAAAATGTTTGATGGCTCATCGA
TTGCTGGTTGGAAAGGGATTGAAGCATCAGACATGATTTTGCGTCCTGATCCTGAGACGGCGTTTATTGACCCGTTCTTT
GATGCGGTTACTGTTGTCGTGACTTGTGACATCATTGAGCCATCAACCCTACAAGGTTATGACCGTGATCCACGCTCTAT
TGCGCGCCGTGCTGAAGAGTATTTAAAATCTACCGGTATTGGTGATACGGCTTTTTTTGGTCCTGAGCCTGAGTTCTTTG
TATTTGATGAGGTAAAATGGTCTGTGGGCATGTCTGGTGTCAGTCATGAAATCGTCGCTGAAGAAGCCGCATGGTCAACC
AATAAAGACTATGAGTGGGGCAACATGGGTCATCGCCCACGTGTCAAAGGCGGTTATGTACCAGTACCACCTGTTGATAG
CTCACAAGATATGCGTACCGTCATGTGTGATCGCATCGAAGATATGATTGGTGAAGGCTGTATCGAAGTACATCACCACG
AAGTTGCCCCTTGTCAGTTAGAAATTGGCGTTGCTTTTAACACGCTTGTACGCAAGGCAGATGAAGTACAAAAGCTCAAA
TATGCCGTACATAACGTTGCTCATCAGTTTGGAAAAACAGCAACCTTTATGCCAAAGCCTATCGTTGGTGATAATGGTTC
TGGTATGCACGTGCATATCTCAATCTCAAAAGATGGGGTTAACACCTTCTCTGGCGATGAATATGCAGGCTTGTCTGAAA
CGGCATTGTATTTCGTAGGCGGTATCATTAAACACGCTCGTGCGCTTAATGCGATTACCAATCCATCGACCAACAGCTAC
AAGCGTCTAGTGCCCCATTATGAAGCGCCTATCAAGCTTGCATACTCAGCATCTAACCGCTCAGCATCTATCCGTATTCC
ACACGTCAGCAGCCCAAAAGCGGTGCGTGTTGAAGCGAGATTCCCTGATCCAGCAGCCAACCCATACTTAGCGTTTGCTG
CACTGTTGATGGCGGGTCTTGACGGTATTCAAAACAAAATGCATCCAGGTGAAGCCGCTGACAAAAACTTGTATGATTTG
CCGCCAGAAGAAGAAGCATTGATTCCAACGGTCGCTGAAAATTTAGAAGTGGCATTGCAAGCACTAAAAGATGATCATGA
ATTTTTATTAAAAGGTGATGTATTCACCAAAGAGATGTTAGAGGCTTATATTGCTCTCAAGCAAGAAGAAGTACAGCGCG
TCAATATCACGGTACATCCCGTTGAGTTTGACTTGTATTACAGCTGCTAA

Protein sequence :
MSNKLLDLIKSSNAKWVDFRFTDTRGKEHHMSFPAHSVDEESMEDGKMFDGSSIAGWKGIEASDMILRPDPETAFIDPFF
DAVTVVVTCDIIEPSTLQGYDRDPRSIARRAEEYLKSTGIGDTAFFGPEPEFFVFDEVKWSVGMSGVSHEIVAEEAAWST
NKDYEWGNMGHRPRVKGGYVPVPPVDSSQDMRTVMCDRIEDMIGEGCIEVHHHEVAPCQLEIGVAFNTLVRKADEVQKLK
YAVHNVAHQFGKTATFMPKPIVGDNGSGMHVHISISKDGVNTFSGDEYAGLSETALYFVGGIIKHARALNAITNPSTNSY
KRLVPHYEAPIKLAYSASNRSASIRIPHVSSPKAVRVEARFPDPAANPYLAFAALLMAGLDGIQNKMHPGEAADKNLYDL
PPEEEALIPTVAENLEVALQALKDDHEFLLKGDVFTKEMLEAYIALKQEEVQRVNITVHPVEFDLYYSC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 4e-100 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
glnA YP_264262.1 L-glutamine synthetase VFG1399 Protein 2e-94 50