Gene Information

Name : tnp (SH0857)
Accession : YP_252772.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Unknown
Product : IS1272 transposase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3666
EC number : -
Position : 857099 - 858430 bp
Length : 1332 bp
Strand : -
Note : truncated

DNA sequence :
ATGTATAAAAATTATAACATGACTCAACTTACTCTACCAATGGAAACTTCAGTTCTTATCCCCACAAATGATATTTCACG
ACATGTAAATGATATTGTTGAAACAATTCCTGACAATGAATTCGACGAATTCAGACATCACCGTGGTGCAACTTCGTACC
ATCCTAAAATGATGTTAAAAGTGATTCTATATGCCTACACACAATCTGTATTCTCAGGTCGTAAAATAGAAAAAATGCTT
AATGATAGCATCCGAATGATGTGGCTATCACAAAATCAAAAACCTTCTTATAAAACAATTAATCGATTTAGAGTAAATCC
AAAAGTAGATGCTTTATTAGAATCTTTATTTATTCAATTTTACAGTCAGTGTGTAAAACAAAATCTTATAGATGATAAAG
CTATTTTTATTGATGGTACAAAAATTGAAGCAAATGCCAATCGATATACATTTGTATGGAAAAAGAGTATTCAAAACCAT
GAATCAAAGATGAATGAGGATTCTAAAGCCCTCTACCATGAATTGGTAACCAATAAAATCATACCGGAAATTAAAGAAGA
TCATGATAATGAATTAACAAAAGAAGAAATAGATTTGATTGGTAGTCACTTAGATAAAGAAATCGAAGATTTAAACCAAC
ATATCAACAATGAAAAATGTACTAAAACAAGAAAACAAATACGTCTCAAAAGAACTAAAATCAAAAAATACAAAAAGCAA
ATCAATGATTATTTTGAGCGAAAGTATCGATACGAATTTCAAAAATCTATTTTAAAGGACAGAAATAGTTATTCTAAGAC
AGATCATGATGCGACCTTTATGAGGATGAAAGAAGATCACATGAAAAATGGACAACTTAAGCCAGGGTATAATTTACAAA
TAGCGACAAATTCCCAATTTGTTTTATCTTATAATGTGTATCAAAATCCAACGGATACTAGAACGATGATTCCATTTTTA
AATTCAATTCAAGAGACCTACGGTCATTTACCTGAATATATTGTAGCTGATGCAGGTTATGGTAGTGAATCAAATTATAA
GGCAATTATAGATGACTTTAATCGAACGCTACTCATAACATATGGAATGTTTATAAAAGATAAAACTAAAAAATATAAAA
GTGACATCTTTAATACTCAAAATTGGAACTATGACGAAATTAATGACGAATTCATTTGTCCGAATAATAAACGGCTAGGT
TTTAAAAGATATGCCTATCGTCATGATAAGTATGGTTATAAGCGAGACTTCAAATTATATGAATGTGATGATTGTTCAGA
ATGTCCTCTGAAAAATCAATGTATGAACTTCAATTCAAAAACAAAAAAATAA

Protein sequence :
MYKNYNMTQLTLPMETSVLIPTNDISRHVNDIVETIPDNEFDEFRHHRGATSYHPKMMLKVILYAYTQSVFSGRKIEKML
NDSIRMMWLSQNQKPSYKTINRFRVNPKVDALLESLFIQFYSQCVKQNLIDDKAIFIDGTKIEANANRYTFVWKKSIQNH
ESKMNEDSKALYHELVTNKIIPEIKEDHDNELTKEEIDLIGSHLDKEIEDLNQHINNEKCTKTRKQIRLKRTKIKKYKKQ
INDYFERKYRYEFQKSILKDRNSYSKTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSQFVLSYNVYQNPTDTRTMIPFL
NSIQETYGHLPEYIVADAGYGSESNYKAIIDDFNRTLLITYGMFIKDKTKKYKSDIFNTQNWNYDEINDEFICPNNKRLG
FKRYAYRHDKYGYKRDFKLYECDDCSECPLKNQCMNFNSKTKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 0.0 99
unnamed BAC67565.1 hypothetical protein Not tested Type-IVc SCCmec Protein 3e-172 99
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 9e-172 99
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 9e-172 99
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 9e-172 99
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 6e-172 99
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 3e-169 99
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 0.0 91