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Name : serS (SH0008) Accession : YP_251923.1 Strain : Staphylococcus haemolyticus JCSC1435 Genome accession: NC_007168 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 11331 - 12617 bp Length : 1287 bp Strand : + Note : catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGTTAGACATTAAACTATTTAGAGAGCAAGCAGACACAGTTAAGAGCAAAATTGAACTACGTGGAGATGATCCTAAAGT AGTTGACGAAGTATTAGAATTAGATAACGAACGTCGTCAATTAATCGGTAAAACTGAAGAAATGAAAGCACGTCGTAACA AAGTAAGTGAAGAAATCGCTGAAAAGAAACGTAACAAAGAAAATGCAGACGACGTCATCAAAGAAATGCGTGAACTTGGT GACGAAATCAAAGAAAACGACGCTAAACTTAACGAAGTGGATAATAAAGTTAGAGATATCTTAATTCGTATCCCTAACCT AATTGCTGAAGATGTACCACAAGGGGATTCTGATGAAGAAAACGTTGAAGTTAAAAAATGGGGTACACCTCGTGAATTTG ACTTTGAACCAAAAGCACACTGGGACTTAGTAGAAGAATTAAAAATGGCAGACTTTGAACGTGCTGCAAAAATTTCAGGT GCGCGTTTCGTATACTTAACTAAAGATGGTGCATTATTAGAACGTGCATTAATGAACTACATGCTTACTAAACATACAAC GCAACACGGTTATACTGAAATGATGACACCTCAATTAGTTAATGCAGATACAATGTTTGGTACTGGTCAATTACCTAAAT TTGAAGAAGATTTATTCAAAGTTGAAAAAGAAGGTTTATACACAATTCCAACTGCAGAAGTTCCATTAACAAACTTCTAT AGAGATGAAATCATCCAACCAGGCGTATTACCAGAAAAATTCACTGCTCAAACAGCTTGTTTTCGTAGTGAAGCAGGATC AGCTGGTAGAGATACAAGAGGTTTAATCCGTTTACACCAATTCGACAAAGTTGAAATGGTTCGTATCGAAAAACCTGAAG ATTCTTGGGACGCTTTAGAAGATATGACACAAAATGCTGAAGCAATTCTTGAAGAATTAGGTTTACCATATCGTCGTGTT ATCTTATGTACTGGCGACATCGGTTTCAGTGCTAGTAAAACATACGACTTAGAAGTATGGTTACCAAGTTATGACAACTA TAAAGAAATTAGTTCTTGCTCAAACTGTACTGATTTCCAAGCGCGTCGTGCTAACATCCGCTTTAAACGTGATGCCGCTT CTAAACCAGAATTAGCACATACTTTAAATGGTAGTGGACTTGCTGTAGGTCGTACATTTGCAGCTATCGTTGAAAACTAT CAAAATGCAGATGGTTCAATAACAATTCCAGAAGCATTAGTACCATTCATGGGTGGTAAAACTGAAATCCGTCCAGTAAA CGACTAA Protein sequence : MLDIKLFREQADTVKSKIELRGDDPKVVDEVLELDNERRQLIGKTEEMKARRNKVSEEIAEKKRNKENADDVIKEMRELG DEIKENDAKLNEVDNKVRDILIRIPNLIAEDVPQGDSDEENVEVKKWGTPREFDFEPKAHWDLVEELKMADFERAAKISG ARFVYLTKDGALLERALMNYMLTKHTTQHGYTEMMTPQLVNADTMFGTGQLPKFEEDLFKVEKEGLYTIPTAEVPLTNFY RDEIIQPGVLPEKFTAQTACFRSEAGSAGRDTRGLIRLHQFDKVEMVRIEKPEDSWDALEDMTQNAEAILEELGLPYRRV ILCTGDIGFSASKTYDLEVWLPSYDNYKEISSCSNCTDFQARRANIRFKRDAASKPELAHTLNGSGLAVGRTFAAIVENY QNADGSITIPEALVPFMGGKTEIRPVND |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 3e-120 | 60 |
