Gene Information

Name : hsdS (SH0063)
Accession : YP_251978.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0732
EC number : -
Position : 71553 - 72776 bp
Length : 1224 bp
Strand : -
Note : hypothetical protein, similar to type I restriction-modification system specificity subunit

DNA sequence :
ATGGAGTATAAACTTGAAAAACTACTTGATAGTGTTTCTATAAAACATCCTTTTTCTAAAAAAAATGTCGTTTTTTTAAA
TACTTCAGACATTGAAGAAGGAAATATTTTAAAAAAGGAATATTCTAAAATTGATGACTTACCTGGTCAAGCCAAAAAGT
CTATCCAACCGAATGATATACTATATAGTGAAATAAGACCTAAAAATAAAAGATATGCTTATATAAATTTTGAATGTGAC
GATTATGTAGTTTCAACTAAGCTAATGGTACTAAGAAATATTAATCCCGATTTAGTGCATAGTAAATACTTGTATTATTT
TTTAATAGATCAAAAAACAGTGAACTACTTACAAAATATAGCTGAATCTAGATCGGGTACCTTTCCTCAAATTACATTTT
CCGAAGTAAAAAATTTAAAGTTAGACTTGCCTAGTATAGAAAAACAAATAACTATTATTAATATAATGGATACTTTAAAT
GAAAAAATAAATAATAATAAAAAAATCATATCAAACCTTGAAGAACTATCACAAACATCGTTTAAACGTTGGTTTGTAGA
TTTTGAATTTCCAGATGAAGATGGTAATCCTTATAAATCTAGTGGTGGAGAAATGATTGATAGTGAATTAGGAGAGATAC
CTAAAAATTGGTCTATCAAAACTGTAAAAGAAATAGCAGAAAGTTTTAATTCTATTAGAAAGCCATTATCAAAAATTGAA
AGAGAAAAAAGAGAATCAATATACCCATATTATGGAGCAACAAAAATCATAGATTATGTAGATAATTATATTTTTGATGG
AAAATATATATTAGTTGGAGAAGATGGAACTGTTCAAACAGAAACAGGTAATCCTTTTATTCAATACGTGTGGGGTAAAT
TTTGGGTAAGTAATCATGCACATATTTTAAAAGGAAAGCTTATTTCAGATGAATTATTAATGCTTTATTTAAAGAACACT
AATGTAGCTCCTTATATAACTGGAGCTGTACAACCAAAGCTTAATAAAAAAAATCTAAATAGCATTAAATTTGTAATAGC
AGATAAAGAAACTATTATTAAATTCGAAAATTCTATAAAATCATATTTTCAAAAAATTAGAATACTTAATAAAGAAAATA
AAAAGCTAATTGAATTACGAGATACGCTTCTTCCTAAACTCATGTCTGGTGAAATAGAAATACCTGATGATATTGAGGTG
AATATAGATGAACTTTCAATTTAA

Protein sequence :
MEYKLEKLLDSVSIKHPFSKKNVVFLNTSDIEEGNILKKEYSKIDDLPGQAKKSIQPNDILYSEIRPKNKRYAYINFECD
DYVVSTKLMVLRNINPDLVHSKYLYYFLIDQKTVNYLQNIAESRSGTFPQITFSEVKNLKLDLPSIEKQITIINIMDTLN
EKINNNKKIISNLEELSQTSFKRWFVDFEFPDEDGNPYKSSGGEMIDSELGEIPKNWSIKTVKEIAESFNSIRKPLSKIE
REKRESIYPYYGATKIIDYVDNYIFDGKYILVGEDGTVQTETGNPFIQYVWGKFWVSNHAHILKGKLISDELLMLYLKNT
NVAPYITGAVQPKLNKKNLNSIKFVIADKETIIKFENSIKSYFQKIRILNKENKKLIELRDTLLPKLMSGEIEIPDDIEV
NIDELSI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hsdS YP_251978.1 hypothetical protein Not tested SCCmec Protein 2e-177 100