|
Name : ccrC (SH0056) Accession : YP_251971.1 Strain : Staphylococcus haemolyticus JCSC1435 Genome accession: NC_007168 Putative virulence/resistance : Unknown Product : casette chromosome site specific recombinase CcrC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG1961 EC number : - Position : 64143 - 65819 bp Length : 1677 bp Strand : + Note : - DNA sequence : ATGAAGGGTAAAATTGCACTTTATTCACGTGTTAGTACGTCTGAGCAGTCAGAACATGGTTATTCTGAAAAGGAGCAGGA ACAACTACTCATCAAAGAAGTTATGAAAAATTTCCCAGGTTATGACTATGAGACATATACTGACTCAGGCATTTCAGGTA AAAATATTGAAGGTCGTCCGGCAATGAAACGTCTATTACAAGATGTTAAGGATAATAAAATCGAAATAGTGTTAAGTTGG AAATTGAATCGTATCTCACGATCAATGAGAGACGTGTTTAATATTATTCATGAATTCAAAGAGCATGGCGTAGGTTATAA ATCGATTTCTGAGAATATTGATACATCCAATGCTTCTGGTGAAGTTTTAGTTACAATGTTTGGATTAATAGGATCAATCG AACGTTCAACACTGGCCAGTAATGTCAAGATGTCGATGAATGCTAAAGCACGGAGCGGAGAGGCAATCACAGGTCGTGTT TTAGGCTACAAATTATCACTTAATCCATTGACACAGAAAAATGATTTAGTTATTGATGAAAATGAAGCTCATATTGTACG GGAAATCTTTGATTTATATTTGAATCACAATAAAGGACTTAAAGCAATCACGACAATTCTAAATCAAAAAGGATATCGCA CCATTAATCAAAAACCATTTTCAGTGTTTGGTGTGAAATATATTTTGAATAATCCAGTCTATAAAGGCTATGTCAGATTC AATAACCATCAAAACTGGGCTGTACAGCGAAGAAGTGGTAAAAGTGATAAAAATGATGTGATATTGGTCAAAGGTAAGCA TGAAGCCATTATAAGTGAAGATGTATTTGATCAAGTTCATGAGAAACTAGCTTCAAAAAGTTTTAAACCGGGACGACCTA TTGGTGGAGATTTCTACTTACGTGGCCTTATTAAATGCCCAGAATGCGGAAATAATATGGTATGTCGACGGACGTATTAT AAAACGAAAAAGTCCAAAGAACGGACAATCAAACGCTATTACATTTGTTCATTATTCAACCGCTCAGGAAGTTCTGCCTG TCATAGTAATGCGATTAATGCTGAAGTCGTCGAACGCGTAATCAATGTTCATTTGAATCGTATTCTTTCACAACCTAATG TTATTAAGCAGATTGCGTCAAGTGTGATAGAAGAACTGAAACAAAAGCATAGTAAACAAACAGAAATAAAATATGATATT GATAGTCTAGAAAAACAAAAAGCAAAAGTTAAAACACAACAAGAACGATTATTGGAATTGTTCTTAGATGATGAAATGGA TAGCGAAATGTTAAAAGCTAAACAAAGTGAAATGAATCAACAGTTAGAAGTATTAGACCAACAAATTAAAGAAGCAAAAC AAGCAAATCAATCACAGGGTGATATACCCAATTTTGATAAGTTAAAAGCACGACTCATTTTGATGATAACACGATTCAGT CTGTACTTAAGAAAGGCTACACCCGAAGCTAAAAATCAACTTATGAAAATGTTAATTGATTCAATTGAAATTACGACAGA TAAACAAGTAAAACTTGTAAGGTATAAAATTGATGAAAGTCTTATCCCTCAATCATTGAAAAAAGATTGGGGGTCTTTTT TTATGCCTAAATTCCAATTCGAAATAGACGGTCGAAACAATTATTTCATCGACCAAATTACCACTTTTACCACTTAG Protein sequence : MKGKIALYSRVSTSEQSEHGYSEKEQEQLLIKEVMKNFPGYDYETYTDSGISGKNIEGRPAMKRLLQDVKDNKIEIVLSW KLNRISRSMRDVFNIIHEFKEHGVGYKSISENIDTSNASGEVLVTMFGLIGSIERSTLASNVKMSMNAKARSGEAITGRV LGYKLSLNPLTQKNDLVIDENEAHIVREIFDLYLNHNKGLKAITTILNQKGYRTINQKPFSVFGVKYILNNPVYKGYVRF NNHQNWAVQRRSGKSDKNDVILVKGKHEAIISEDVFDQVHEKLASKSFKPGRPIGGDFYLRGLIKCPECGNNMVCRRTYY KTKKSKERTIKRYYICSLFNRSGSSACHSNAINAEVVERVINVHLNRILSQPNVIKQIASSVIEELKQKHSKQTEIKYDI DSLEKQKAKVKTQQERLLELFLDDEMDSEMLKAKQSEMNQQLEVLDQQIKEAKQANQSQGDIPNFDKLKARLILMITRFS LYLRKATPEAKNQLMKMLIDSIEITTDKQVKLVRYKIDESLIPQSLKKDWGSFFMPKFQFEIDGRNNYFIDQITTFTT |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccrC | YP_251971.1 | casette chromosome site specific recombinase CcrC | Not tested | SCCmec | Protein | 0.0 | 100 |
| unnamed | ACL99844.1 | cassette chromosome recombinase C2 | Not tested | Type-V SCCmec | Protein | 0.0 | 98 |
| ccrC2 | BAG06212.1 | cassette chromosome recombinase C2 | Not tested | Type-VII SCCmec | Protein | 0.0 | 98 |
| SAPIG0050 | YP_005732860.1 | cassette chromosome recombinase C | Not tested | Type-V SCCmec | Protein | 0.0 | 98 |
| unnamed | BAC53834.1 | site-specific recombinase | Not tested | SRImec-III and SCCmec-III region | Protein | 0.0 | 96 |
| unnamed | BAB47672.1 | site-specific recombinase | Not tested | Type-III SCCmec | Protein | 0.0 | 96 |
| ccrC | BAD24834.1 | cassette chromosome recombinase C | Not tested | Type-V SCCmec | Protein | 0.0 | 95 |
| unnamed | ACL99832.1 | cassette chromosome recombinase C8 | Not tested | Type-V SCCmec | Protein | 0.0 | 95 |
| ccrC8 | BAG06191.1 | cassette chromosome recombinase C8 | Not tested | Type-VII SCCmec | Protein | 0.0 | 95 |
| SAPIG0035 | YP_005732845.1 | cassette chromosome recombinase C7 | Not tested | Type-V SCCmec | Protein | 0.0 | 95 |
| SSP0046 | YP_300136.1 | cassette chromosome recombinase C | Not tested | SCC15305cap | Protein | 0.0 | 92 |
