Gene Information

Name : SH0053 (SH0053)
Accession : YP_251968.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0749
EC number : -
Position : 60832 - 61941 bp
Length : 1110 bp
Strand : +
Note : similar to unknown protein

DNA sequence :
ATGTATCAAGCAAATATACGTGATTTAATTACAAAATTGCCTCAAAGCAATAAAACAGAACACTTTTTAATGAACAAATT
TTCAAATCAAGATAAAGTTCAGCAGCTACAAAGACAAATTAGCCAACAGCTAGATCAACAATATAATGAGCTTTTGGCTA
ATGAAAAAGCTAAGCTAGACCAATACGTGGAAGTACACCATAATTTAGAACCATTAAAGAAAGAGATTGAATCAGAATCT
ATTAACCTTGATACCGATAAATTACCTGATATCAAAGCGACAATGCTTGAAAAGGCTAAGAACGATGAACATTTTGATAA
AATCGAACAGCTATTTGATAGATTAGATCAGTCATTAAATGGTACGAATCGATTATATACGCAATTATCGTTGATTGGCA
CACGAACACATCGGATCACAACGAAAAGATTTAATGTTCAAGGCTTGCCTAAATTAGTCCAACAAATGATTTTACCTTCG
CAATTTAAAAAGGTTTATACAATAGATTTTAAATCATTCGAACCATCAGTTGCTGCGTATATGACACAAGACGAACAACT
GATTGACTACTTGAATCATGAAGAAGGGTTATACGATGCATTACTGAGAGACTTATCTTTGTCAAAAGAGAAGCGCGTGA
GTGTGAAACGTGCATTTATAGGGTCATTTCTTTTTGGCGGTCGTTATAGTAGCTCTAAATTCAAAATCAATCAAGAGGTT
AGTGAAATTAACTGGCTACAAGTAATGAGCAAATTCAAGAAGGTCATTGAATTTAAGGAGCAAGTCGAAAAATATAAAAC
AATGCCTACGCCTTACGGCATTGAACATGATATGAGCGCATTTCAAGGTAGTAGTATTATGGCAATTTATGTACAAACGG
TAGCAAGCTATATTTTCAAGCACATTTTGTTGGAAGTGTACAAAGCACAGTGCGAAAAAAAAACGTTCAAGATTATAGTG
CCGATACACGATGCGATTATGATTGAATGTAATGATAAGGGGATTGCACAAAATGTAGCACAGCTCATGAAAGATACAGC
TAATCAACTGTTTAATGGTGAATTTGCACATGTGACAGTGGAAGCTTTAGGAGGTATAGACAATGAATAA

Protein sequence :
MYQANIRDLITKLPQSNKTEHFLMNKFSNQDKVQQLQRQISQQLDQQYNELLANEKAKLDQYVEVHHNLEPLKKEIESES
INLDTDKLPDIKATMLEKAKNDEHFDKIEQLFDRLDQSLNGTNRLYTQLSLIGTRTHRITTKRFNVQGLPKLVQQMILPS
QFKKVYTIDFKSFEPSVAAYMTQDEQLIDYLNHEEGLYDALLRDLSLSKEKRVSVKRAFIGSFLFGGRYSSSKFKINQEV
SEINWLQVMSKFKKVIEFKEQVEKYKTMPTPYGIEHDMSAFQGSSIMAIYVQTVASYIFKHILLEVYKAQCEKKTFKIIV
PIHDAIMIECNDKGIAQNVAQLMKDTANQLFNGEFAHVTVEALGGIDNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ACL99841.1 hypothetical protein Not tested Type-V SCCmec Protein 6e-165 100
SAPIG0047 YP_005732857.1 hypothetical protein Not tested Type-V SCCmec Protein 8e-165 100
unnamed BAG06208.1 hypothetical protein Not tested Type-VII SCCmec Protein 6e-165 100
SH0053 YP_251968.1 hypothetical protein Not tested SCCmec Protein 8e-165 100
unnamed BAD24831.1 hypothetical protein Not tested Type-V SCCmec Protein 8e-161 97
unnamed BAB47676.1 hypothetical protein Not tested Type-III SCCmec Protein 1e-128 77
unnamed BAC53839.1 hypothetical protein Not tested SRImec-III and SCCmec-III region Protein 1e-128 77
unnamed ACL99829.1 hypothetical protein Not tested Type-V SCCmec Protein 1e-128 77
unnamed BAG06188.1 hypothetical protein Not tested Type-VII SCCmec Protein 1e-128 77
SSP0043 YP_300133.1 hypothetical protein Not tested SCC15305cap Protein 3e-127 77
SAPIG0031 YP_005732841.1 hypothetical protein Not tested Type-V SCCmec Protein 2e-128 77
unnamed BAB46986.1 hypothetical protein Not tested Type-IIIinv SCCmec Protein 7e-115 76