Gene Information

Name : aldA (SH0547)
Accession : YP_252462.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : C : Energy production and conversion
COG ID : COG1012
EC number : -
Position : 558861 - 560354 bp
Length : 1494 bp
Strand : +
Note : aldehyde dehydrogenase homologue

DNA sequence :
ATGGCAAAAGTAAACGTTAGAGATTTCATAGAGGAACAATACGGTTTATTTATCAACGGTGAATTTCAAGCAAGCGAAAG
TGGAGACACATTAACTGTAACTAACCCTGCGAATGGTGAAGATTTAGCTAAAGTAGCTAAAGCAAGTAAATCTGATGTTG
ATAAAGCAGTACAAGCTGCACAAGATGCTTTTGACAGTTGGAGTAAGACATCTAAAGAAGAACGTGCGGACTATTTATTA
GAAATTAGTCGTCGAATTCATGAAAAAGTGGAACACTTCGCGACAATTGAATCGTTACAAAATGGTAAGCCTTATCGAGA
AACGTCAACAATTGATGTGCCATTAACAGCAAATCAATTTAAATATTTTGCGAGTGTATTAACAACAGACGAAGGTTCAG
TCAATGAAATTGATGAGAATACAATGAGTTTAGTAGTCAATGAACCAGTAGGTGTTGTTGGTGCAGTAGTTGCATGGAAC
TTCCCAATTTTATTAGCGTCATGGAAATTAGCACCAGCATTAGCTGCGGGTAATACAATTGTGATTCAACCATCTTCTTC
TACACCATTATCATTAATTGAACTTGCGAAGATCTTCCAAGAAGTATTACCTAAAGGTGTCGTAAACGTATTAACTGGTA
AAGGTTCAGAATCAGGCGATGCAATCTTCAATCATGAAGGTGTAAACAAATTATCATTTACAGGATCAACAGACGTTGGT
TACGGCGTTGCGAAAGCAGGTGCTGAACGTATCGTTCCAACTACATTAGAACTTGGTGGTAAAAGTGCTAATATCATCTT
TGACGATGCAAATTTAGATCAAGTTGTTGAAGGTGCTCAATTAGGTATTTTATTCAACCAAGGTGAAGTATGTAGTGCTG
GTTCACGTTTATTAGTACAATCTTCAATTTATGATAAAGTAATGCCTAAATTAAAAGAAGCTTTCGAAAATATCAAAGTG
GGAGATCCATTTGATGAAGACGTTAAAATGAGTGCTCAAACTGGCCCAGAACAACTTGAAAAAATTGAAAGCTACGTAAA
AATTGCAGAAGAAGATTCAAATGCAAATATCTTAACAGGTGGTCATCGCTTAACAGATAATGGACGTGACAAAGGATACT
TCTTCGAGCCTACAATCATCGAAATTAAAGATAATAGTCATCAATTAGCACAAGAAGAAATTTTCGGACCAGTTGTAGTA
GTAGAAAAATTTGAAGATGAAGCTGAAGCGATTAAAATTGCGAATGATTCAGAATACGGTTTAGCGGGTGGTATCTTTAC
TACTAATATTAACCGTGCATTAAATGTTGCTAAAGCGATGAGAACTGGTCGTATTTGGATTAACACTTATAACCAATTCC
CAGCTGGTGCGCCATTCGGTGGATATAAAAAATCTGGTATCGGTCGTGAAATTTATAAAGACGCTATTAAAAACTATCAA
CAAGTTAAAAATATCTTCATTGATACTAGCAATCAAACAAAAGGATTATACTAA

Protein sequence :
MAKVNVRDFIEEQYGLFINGEFQASESGDTLTVTNPANGEDLAKVAKASKSDVDKAVQAAQDAFDSWSKTSKEERADYLL
EISRRIHEKVEHFATIESLQNGKPYRETSTIDVPLTANQFKYFASVLTTDEGSVNEIDENTMSLVVNEPVGVVGAVVAWN
FPILLASWKLAPALAAGNTIVIQPSSSTPLSLIELAKIFQEVLPKGVVNVLTGKGSESGDAIFNHEGVNKLSFTGSTDVG
YGVAKAGAERIVPTTLELGGKSANIIFDDANLDQVVEGAQLGILFNQGEVCSAGSRLLVQSSIYDKVMPKLKEAFENIKV
GDPFDEDVKMSAQTGPEQLEKIESYVKIAEEDSNANILTGGHRLTDNGRDKGYFFEPTIIEIKDNSHQLAQEEIFGPVVV
VEKFEDEAEAIKIANDSEYGLAGGIFTTNINRALNVAKAMRTGRIWINTYNQFPAGAPFGGYKKSGIGREIYKDAIKNYQ
QVKNIFIDTSNQTKGLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 2e-95 45
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 1e-97 44
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 1e-97 44
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 1e-97 44
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 3e-97 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
aldA YP_252462.1 hypothetical protein VFG0082 Protein 7e-96 45