Gene Information

Name : SH0052 (SH0052)
Accession : YP_251967.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 58649 - 60637 bp
Length : 1989 bp
Strand : +
Note : no similarity

DNA sequence :
GTGAATAAAAATATTACAGCTCTAAAATCTACTGAAAATACTACATATATGCAGTATACGGTTCATATCGATGATCAAAT
TATAAATAATATAAAAGAGTGTACCAAAAAGTTTAAAATTTTGCCTATGGAAGATAAAATTCCATTATCACCGTTGTTAC
AACCAGAATATGCAGGAGAGGTACAAGATTTTATTAGTACATATGAGCAGTTTATGATTAATTTTGGTAAAGTAATATTG
GATAGTCAAGGCATAAAAATACAGTTTGAAAGTGAATCATTAAGTAGTATTCAACGAGGCATTCAAGAACATTGTTACTT
AAATGAGCGAACAAATGACATTGATGTGACTAAAGAATGGTATTTATGCAAATTTTCAAATCAAATATTAGAAGAGGATA
AAAATCAATTGTATAATGCTTTAAAGCAACTCATGAATGATTCTAAAAATAAAAAGCAAGCTTTTCAAGAGGTGTTTAAG
GTTCATATTGATATTTATCTCTACAATAAAGAAAAATCTGAATATAAGTATCAAGTATCTAGTTATTTCAATCTTGTAAA
AGAAAATCCTAAAATAACTTATAAAAAAAGACATTTACAAGAGAAACAAGGTGTCAAGGGTACAACTTTCACGAACAAAT
TAAAATTATTGAACAAAATGTATGGTGTAGATGTTGCAAAATATCAGCCATTTTATAATTCTAATAATCCTGAATATGAA
AGAGGTCAATTTGGTGAAAGATACATTTCTCAAAGATCTAACTATGAATTTAATAGACTTCAATATCAAATTATAGATAT
GTTATCGAAAATACTTGATAAGCATCCATTACCAAAGTCAGATAATAATTATAAACATATTCCAACTATTGAAAAAGCAA
TATTAAGTGGGGATTCTCATAGTTTTTATGAGTATTTTGAAGATATAATGAAAGAAATTATAAGTATGGAAAATTCTTCT
TTAAAGGAAAAATTATTGACTGATTTTACATATCAATCTCAATGTAGATGGTACTCTGAAAGTGAAAAATTAAAATTGCA
ACTTGAAAGTTTTATGCATAAAGTTTTGGAGAGCAATTATTATGAGGGTAACAAATTATATAGAATGTTGTCTCATGCAA
TTGAAGAAACAATCAATGAGGCTGATGAAGATAAGGTTCATTTCAATTATTTTAAAGATTATTTTTTGACAGACGGTGGG
GTGAAGAATTGGGAGCAGATTAGCGAGAAAATTACTGAATTCAATGGTAAAGTTATTAACGATATCCAAAATGAATATAA
TAAGATTCAATTTAATAACGCAAATCGAAATCAGAAACTAAACTTTAATTATTTATACCATTGCTTTGAGTTTAGTAATA
ACTTAGTAAAAGCAAGGGTAAATGGAAATAGAGGTTACATTTTATATTTTGTAGATAAATATAAAATAAAAATGCCCTTT
TTGGATCAATTATTAATCAATTATTTGAATCAAGAAATAGGTCAGGAAAGTATTAATTATAATATGCAAACATTGTTTGA
AAAAGAAAGATATGATAGAAGTAGTACCATTGAAAAATTAGTAGCAACAAGCAAATTTAAGTATGAAAAAGATGATTCAG
ATTTATTCAAACAACTTTTCAATGATGTTGAAAATTCAATAGACAGATTAGGTATTTACTTACTAAATAATGGTATAAAT
TCGAATGATGAAAATGCAAGATATTATAGATCGTTTTTAAAGGAACTTAGTAGAATAAAAAGTAAATTAACGCCATTTTC
TCTTGAAATAAGTAAGTCTAGCGGAAGAGAGCAACATTATCCTGATGATGCTATTGATGATAAAGATGAGAGAAGAAAAA
ATAAAGAAGAAACATATCATGCTTTTGATGATAAAAGCGATATTGACTCCAAATTAAAGAATAAAATAAATGTTTCTATC
GATAATTTATTGTCAGTTAAAATTAAGAGCAATTTGTATGATATTAGTCCAAATACAAAAAAACAATAA

Protein sequence :
MNKNITALKSTENTTYMQYTVHIDDQIINNIKECTKKFKILPMEDKIPLSPLLQPEYAGEVQDFISTYEQFMINFGKVIL
DSQGIKIQFESESLSSIQRGIQEHCYLNERTNDIDVTKEWYLCKFSNQILEEDKNQLYNALKQLMNDSKNKKQAFQEVFK
VHIDIYLYNKEKSEYKYQVSSYFNLVKENPKITYKKRHLQEKQGVKGTTFTNKLKLLNKMYGVDVAKYQPFYNSNNPEYE
RGQFGERYISQRSNYEFNRLQYQIIDMLSKILDKHPLPKSDNNYKHIPTIEKAILSGDSHSFYEYFEDIMKEIISMENSS
LKEKLLTDFTYQSQCRWYSESEKLKLQLESFMHKVLESNYYEGNKLYRMLSHAIEETINEADEDKVHFNYFKDYFLTDGG
VKNWEQISEKITEFNGKVINDIQNEYNKIQFNNANRNQKLNFNYLYHCFEFSNNLVKARVNGNRGYILYFVDKYKIKMPF
LDQLLINYLNQEIGQESINYNMQTLFEKERYDRSSTIEKLVATSKFKYEKDDSDLFKQLFNDVENSIDRLGIYLLNNGIN
SNDENARYYRSFLKELSRIKSKLTPFSLEISKSSGREQHYPDDAIDDKDERRKNKEETYHAFDDKSDIDSKLKNKINVSI
DNLLSVKIKSNLYDISPNTKKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAD24830.1 hypothetical protein Not tested Type-V SCCmec Protein 0.0 100
SAPIG0046 YP_005732856.1 hypothetical protein Not tested Type-V SCCmec Protein 0.0 100
SH0052 YP_251967.1 hypothetical protein Not tested SCCmec Protein 0.0 100
unnamed ACL99840.1 hypothetical protein Not tested Type-V SCCmec Protein 0.0 100
unnamed BAG06207.1 hypothetical protein Not tested Type-VII SCCmec Protein 0.0 99