Gene Information

Name : SH0043 (SH0043)
Accession : YP_251958.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2070
EC number : -
Position : 52978 - 53925 bp
Length : 948 bp
Strand : -
Note : hypothetical protein, similar to 2-nitropropane dioxygenase

DNA sequence :
ATGATAGGAGCAGGTTATTTTGATTCACATCAACTTTCAAAAGAGATTTTAGAAGTTCAAAAACTGACACAAGCTCCTTT
TGCAGTAAATCTATTTACCCCCAATGATATTAAGTACGATAAAAAACAAATTGAGCAGATGAATACAAAACTCAAACCAT
ATAGAGAAGCGCTTGGATTATCTACTCCCAAAAATAGTACGGTTAAAGAAAAAGAAAAGTTTGAAGATGCAATAGAAGTT
ATTGAATCATTAAAAGTACCTATCATTGCTTTTACTTTTGGTATTCCAAATCAAAATATTATTAAACGACTTCATAATGC
AGGAAAAATTTTAATTGGAACTGCAACATCAGTCGAAGAAGCAGTTGAAAATGAAAATGCCGGTATGGATATAGTTGTAG
CCCAGGGCTATGAAGCAGGTGGCCACAGAGGATCATTTACAACAATCAATGGTGAATTTCCATTGGTCGGTACTTTATCT
TTAGTACCACAAATTGTTGATAATGTGTCTATACCAGTTATTGCAGCTGGTGGTATTATGGATGGAAGAGGTTTAGTAGC
TAGTTTAGCTTTGGGGGCTGGAGCAGCGCAATTAGGTACTGCTTATTTAACAACGAATGAAAGTGGCGCTGATGACAAAA
TCAAAAATGAAATTATTGAAAGCTCTGAAACAGATACAATACTGACAAATGTATTTAGTGGCAAATTGGCTCGCGGAATT
ATGAATGAATTTGTACACAATATGAATTTATATTCAAAACAGGTGCCTCCTTATCCTTTACAAAATCAATTAACAACGCA
AATACGAAAATCTGCTTTGGAGAAAGGATATACTGAGTGGACCCATATTTGGAGTGGACAAAGTACTAGATTAGCTGACA
CGGTCGATGCAGCTCAATTAACAAAAAATATTATTAATGATGCAGTCAAAATTATCAATAATAAGTGA

Protein sequence :
MIGAGYFDSHQLSKEILEVQKLTQAPFAVNLFTPNDIKYDKKQIEQMNTKLKPYREALGLSTPKNSTVKEKEKFEDAIEV
IESLKVPIIAFTFGIPNQNIIKRLHNAGKILIGTATSVEEAVENENAGMDIVVAQGYEAGGHRGSFTTINGEFPLVGTLS
LVPQIVDNVSIPVIAAGGIMDGRGLVASLALGAGAAQLGTAYLTTNESGADDKIKNEIIESSETDTILTNVFSGKLARGI
MNEFVHNMNLYSKQVPPYPLQNQLTTQIRKSALEKGYTEWTHIWSGQSTRLADTVDAAQLTKNIINDAVKIINNK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SH0043 YP_251958.1 hypothetical protein Not tested SCCmec Protein 2e-131 100