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Name : capD (SH0391) Accession : YP_252306.1 Strain : Staphylococcus haemolyticus JCSC1435 Genome accession: NC_007168 Putative virulence/resistance : Virulence Product : capsular polysaccharide biosynthesis protein CapD Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1086 EC number : - Position : 404184 - 405983 bp Length : 1800 bp Strand : + Note : - DNA sequence : GTGGACAAGTTAAGTGCAAGAGGACGTCTTTTAATATTAATTATAATAGATTCACTTATTGTAGCTTTTTCAGTTTTTAT TTGTTACAACATTTTAGAACCTTTTTTTGAAGGGTATTCAAGGGATCTTTTAATTGTTAATTCAATTGTATTACTGATTT CGCATCATGTCTTTGCATACATATTTAATCTTTATCATCGTGCTTGGGAGTACGCTAGTGTTAATGAGCTTCTATTAATC GTAGAGTCGGTTACATGTTCAATTATCACAACGATGATTTTAGTTCCAATCTTTACTGCACATCCACCGTTTTTTAGATT ATATTTAATAACTTGGATGATGCATTTGATCCTTATAGGTGGTTCAAGAATATCGTGGCGAGTTGCTAGAGGATTTGTCG TAGGTAAAAAGCTAAAGAAAAAACCGACACTCATTGTAGGCGCAGGTCGCGGTGGTTCTTTATTAATCCGTCAAATGTTG AGAAGTCCAGAAATGGGTCTTGAACCAGTATTAGTTGTTGATGACGATCCACAAAAGAAAAAATTGACTATTGCTGAGGG CGTCAAAGTACAAGGATCTATTGATGATATTCCAAATTTAGTTAATAAATATAGAATTAAGCGTATTATCATTGCCATAC CCACACTTAAACCAGATCGGCTTAAAGAGATAAATAATATTTGTAATAGTACTGGAATCGAGTTATTTAAAATGCCAAGT ATTGAACAAGTTCTTGTGGGTGAATTGGAAGTTAATCAATTAAAACGTGTAGAAGTTGAAGATTTACTTGGACGAGAACC AGTTGAATTAGATATGGCCATGATTTCTAAAGAACTTACGCATAAAACAATTATGATTACTGGTGCAGGTGGGTCAATTG GCTCTGAAATATGTAGACAAGTATGTAAATTTGAACCAGAACGTATACTATTACTGGGCCACGGTGAAAATAGTATTTAT CTTATTCATCAAGAATTAAATGCGATTTACAAGGATAAAATAGAAATTATACCAATTATAGCTGATGTACAAAATGGAGA TCGTATTCAAGAAATTATGGATAAATATAAACCATATGCAGTTTATCATGCCGCTGCGCATAAACATGTACCATTGATGG AATACAATCCTATAGAGGCTTTCAAAAATAATGTTTTAGGAACTAGAAATGTTGCAACTGTCGCTAAAAATGTGGGAGTA AGAAAATTTGTAATGGTTTCGACTGATAAAGCAGTCAATCCACCAAATGTAATGGGGGCTTCTAAACGTGTAGCGGAAAT GGTAGTCCAAAGTTTAAACGATGAAAATTGCGTAACGGACTTTGTAGCAGTACGTTTTGGTAATGTTTTAGGTTCTCGTG GATCAGTTATTCCACTATTTAAAAAACAAATTGCTGCAGGTGGGCCAGTAACTGTCACACATCCAGATATGACTAGATAT TTTATGACTATTCCAGAAGCATCAAGATTAGTACTTCAAGCAGGAGCTTTAGCTAAAGGTGGAGAAGTATTCGTATTAGA TATGGGAGAACCAGTTAAAATTGTTGATTTGGCAAGAAATTTAATAAGACTTAGTGGAAAAACTGAAGATGAAATTCCAA TTAAGTTTAGCGGTATCAGACCAGGAGAAAAGATGTATGAAGAATTATTAAATGAAAACGAAATACATCCTGAACAAGTA TACGAAAAAATCTATCGTGGTAAAGTTAGAGATTTCTCTAAAGAAGAAGTAGATGCGATTGTTAGTGATTTAGCGAACGA TTTTAAAAAAGAAAAAATTATTAAGATAGCTAATGAATAG Protein sequence : MDKLSARGRLLILIIIDSLIVAFSVFICYNILEPFFEGYSRDLLIVNSIVLLISHHVFAYIFNLYHRAWEYASVNELLLI VESVTCSIITTMILVPIFTAHPPFFRLYLITWMMHLILIGGSRISWRVARGFVVGKKLKKKPTLIVGAGRGGSLLIRQML RSPEMGLEPVLVVDDDPQKKKLTIAEGVKVQGSIDDIPNLVNKYRIKRIIIAIPTLKPDRLKEINNICNSTGIELFKMPS IEQVLVGELEVNQLKRVEVEDLLGREPVELDMAMISKELTHKTIMITGAGGSIGSEICRQVCKFEPERILLLGHGENSIY LIHQELNAIYKDKIEIIPIIADVQNGDRIQEIMDKYKPYAVYHAAAHKHVPLMEYNPIEAFKNNVLGTRNVATVAKNVGV RKFVMVSTDKAVNPPNVMGASKRVAEMVVQSLNDENCVTDFVAVRFGNVLGSRGSVIPLFKKQIAAGGPVTVTHPDMTRY FMTIPEASRLVLQAGALAKGGEVFVLDMGEPVKIVDLARNLIRLSGKTEDEIPIKFSGIRPGEKMYEELLNENEIHPEQV YEKIYRGKVRDFSKEEVDAIVSDLANDFKKEKIIKIANE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 0.0 | 75 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 0.0 | 72 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| capD | YP_252306.1 | capsular polysaccharide biosynthesis protein CapD | VFG1300 | Protein | 0.0 | 73 |
