Gene Information

Name : capB (SH0389)
Accession : YP_252304.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis protein CapB
Function : -
COG functional category : D : Cell cycle control, cell division, chromosome partitioning
COG ID : COG0489
EC number : -
Position : 402683 - 403384 bp
Length : 702 bp
Strand : +
Note : -

DNA sequence : 
ATGCCTAAAAAGAATAAAGAAAAAAGAAAAAAATTGTCTCATCCTTTATATGTCCATGATAAACCTAAATCTGTAGCAAG
TGAGAGATTTAGAGGAATAAGATCAAACATTATGTTTTCTGGAGTAGAAGAGGCTAATAGTATTATTGTTACCTCTGAAA
AACCAGCAGCAGGGAAAAGCATTGTTTCAGCTAATATTGCAATAACTTATGCTCAAGCTGGTTATAAAACTTTAATTATA
GATGGAGATATGAGAAAGCCTACTCAGCATTATGTCTTTGAAACTTCGAATTATGATGGCCTTTCGAATTTAATAGTAGG
AAAAAGTGATTTTGAAACAGCTATTCGCTCTACAAGAGTTGAAAATCTAGATTTATTAACTTCAGGACCAATACCTCCTA
ATCCTTCGGAACTTATAGCATCTGAAAAATTTGAAAATATTTTGAATGATCTTTTTAAATATTACGACTTTATTTTGATA
GATACTCCACCTGTAAATACAGTTACAGATGCTCAAGTATTTATGCAGTATGTCAAAGAATGTGTATTAATAATTGACGT
AGAAAACAATAATAAAGATGAATTAAAAAAAGCAAAATCATTAATTGAAAAAGCAGAAGGGCGTCTTCTAGGAGCAGTAC
TCAATAAAACGCCTGTGGATAAGTCATCTAGCTACTACTATTATTATGGGGAAGATGAATAA

Protein sequence : 
MPKKNKEKRKKLSHPLYVHDKPKSVASERFRGIRSNIMFSGVEEANSIIVTSEKPAAGKSIVSANIAITYAQAGYKTLII
DGDMRKPTQHYVFETSNYDGLSNLIVGKSDFETAIRSTRVENLDLLTSGPIPPNPSELIASEKFENILNDLFKYYDFILI
DTPPVNTVTDAQVFMQYVKECVLIIDVENNNKDELKKAKSLIEKAEGRLLGAVLNKTPVDKSSSYYYYYGEDE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1B AAA64641.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-70 69
SSP0061 YP_300151.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-59 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capB YP_252304.1 capsular polysaccharide synthesis protein CapB VFG1298 Protein 4e-61 63