Gene Information

Name : vraD (SH2664)
Accession : YP_254579.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein VraD
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2669881 - 2670639 bp
Length : 759 bp
Strand : +
Note : -

DNA sequence : 
ATGCCAATTCTAAACGTCAATCATTTATCAAAAGTATACGGAAGTAAACAAAAATATAAAGCCCTACACGACATCAACTT
TTCAGTGGACAAAGGAGAATTCGTCGCCATAATGGGACCTTCAGGTTCAGGTAAGACTACCCTCCTCAATGTCATTAGTT
CCATCGATAGTATTTCTGGAGGAACTGTAGAAGTAAGTGGCAATGAAATTAATCAACTTAAAGATAAGCAGTTAGCACAA
TTTCGTAAGAAAGAACTTGGATTTATCTTCCAAGATTATAGTGTCTTACCTACCTTAACTGTTAAAGAAAACATTATGTT
GCCACTATCCGTTCAAAAAGTAAGTAAAGATGAGATGGAACAAAATTATAAAGAAGTTACTGAAGCACTCGGTATTTATG
AGTTAAGCGATAAATATCCAAGCGAAATATCAGGTGGTCAGCAACAACGTACCGCTGCCGCACGTGCATTCGTTCATAAA
CCGGCTATTATCTTTGCCGATGAACCGACAGGAGCACTTGATTCGAAAAGTGCGCAAGACTTACTCAACCGTCTAGAAGA
TATGAACGAGCGATTCAATAGCACGATAATCATGGTAACTCATGACCCATCTGCAGCGAGTTTCGCACAGCGTGTCATTA
TGTTAAAAGATGGCAATATTCATTCAGAAATCCATCAAGAAGATAAATCTAAACGCGAATTTTATAATGAAATCATTCAA
TTACAGTCAGCCTTAGGTGGTGTCGCAAATGACGTTTAA

Protein sequence : 
MPILNVNHLSKVYGSKQKYKALHDINFSVDKGEFVAIMGPSGSGKTTLLNVISSIDSISGGTVEVSGNEINQLKDKQLAQ
FRKKELGFIFQDYSVLPTLTVKENIMLPLSVQKVSKDEMEQNYKEVTEALGIYELSDKYPSEISGGQQQRTAAARAFVHK
PAIIFADEPTGALDSKSAQDLLNRLEDMNERFNSTIIMVTHDPSAASFAQRVIMLKDGNIHSEIHQEDKSKREFYNEIIQ
LQSALGGVANDV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-30 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-30 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vraD YP_254579.1 ABC transporter ATP-binding protein VraD NC_012469.1.7686878. Protein 2e-34 42
vraD YP_254579.1 ABC transporter ATP-binding protein VraD CP001581.1.gene798.p Protein 9e-36 42
vraD YP_254579.1 ABC transporter ATP-binding protein VraD CP001581.1.gene598.p Protein 4e-38 41