Gene Information

Name : SH2490 (SH2490)
Accession : YP_254405.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Unknown
Product : pyridoxal biosynthesis lyase PdxS
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0214
EC number : -
Position : 2491772 - 2492659 bp
Length : 888 bp
Strand : -
Note : with PdxT forms pyridoxal 5'-phosphate from glutamine, either ribose 5-phosphate or ribulose 5-phosphate, and either glyceraldehyde 3-phosphate or dihydroxyacetone phosphate

DNA sequence :
ATGTCTAAAATCGTAGGATCAGATCGAGTTAAACGAGGAATGGCTGAGATGCAAAAAGGCGGCGTTATTATGGACGTTGT
TAATGCAGAACAAGCTAAAATTGCAGAAGAAGCTGGCGCAGTTGCGGTTATGGCTTTAGAACGTGTACCATCTGACATCA
GAGCAGCTGGTGGGGTAGCACGTAGCGCTAATCCTAAAATTGTTGAAGAAGTTATGAATGCTGTATCAATTCCAGTTATG
GCGAAAGCACGTATTGGTCATATTACTGAAGCACGTGTGTTAGAAGCTATGGGCGTAGATTATATTGATGAATCAGAAGT
GTTAACACCTGCTGATGAAGAATATCATTTAAGAAAAGATCAATTCACGGTTCCTTTTGTATGTGGTTGTCGTAACTTAG
GTGAAGCTGCGCGTCGTATTGGTGAAGGTGCTGCAATGTTACGTACTAAAGGTGAACCTGGTACTGGTAACATTGTAGAA
GCAGTTAGACATATGAGAAAAGTTAATTCAGAAGTTAGTCGCTTAGTTGTGATGAATGACGATGAAATTATGACTTATGC
TAAAGAACTTGGTGCGCCTTATGAAGTTTTAAAACAAATCAAAGATCACGGACGTTTACCAGTAGTTAACTTTGCAGCTG
GTGGCGTTGCTACACCTCAAGATGCTGCTTTAATGATGGAATTAGGTGCTGATGGTGTATTTGTTGGTTCAGGTATTTTC
AAATCTGAAGATCCTGAGAAATTTGCTAAAGCAATTGTTCAAGCTACAACGCATTACCAAGATTATGAGCTTATTGGCAA
ATTAGCTTCAGAATTAGGCACAGCAATGAAAGGTTTAGATATTAATCAAATCTCATTAGAAGAACGTATGCAAGAGCGTG
GTTGGTAA

Protein sequence :
MSKIVGSDRVKRGMAEMQKGGVIMDVVNAEQAKIAEEAGAVAVMALERVPSDIRAAGGVARSANPKIVEEVMNAVSIPVM
AKARIGHITEARVLEAMGVDYIDESEVLTPADEEYHLRKDQFTVPFVCGCRNLGEAARRIGEGAAMLRTKGEPGTGNIVE
AVRHMRKVNSEVSRLVVMNDDEIMTYAKELGAPYEVLKQIKDHGRLPVVNFAAGGVATPQDAALMMELGADGVFVGSGIF
KSEDPEKFAKAIVQATTHYQDYELIGKLASELGTAMKGLDINQISLEERMQERGW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdxS YP_005137204.1 pyridoxine biosynthesis protein Not tested Not named Protein 9e-79 60
DIP0227 NP_938620.1 pyridoxal biosynthesis lyase PdxS Not tested Not named Protein 1e-78 60
pdxS YP_005141805.1 pyridoxine biosynthesis protein Not tested Not named Protein 1e-78 60