Name : clpC (SH2484) Accession : YP_254399.1 Strain : Staphylococcus haemolyticus JCSC1435 Genome accession: NC_007168 Putative virulence/resistance : Virulence Product : endopeptidase Clp ATP-binding subunit C Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG0542 EC number : - Position : 2485203 - 2487677 bp Length : 2475 bp Strand : - Note : - DNA sequence : ATGCTATTTGGTAGATTAACTGAACGTGCACAACGTGTCCTAGCACACGCACAAGAAGAAGCAATACGTTTAAATCATTC TAATATAGGTACAGAACATTTGTTATTAGGTTTAATGAAAGAACCAGAAGGTATTGCTGCTAAAGTATTAGAAAGTTTTA ATATAACCGAAGATAAAGTGATTGAAGAAGTCGAAAAATTAATCGGTCACGGACAAGATCAAACAGGAACATTGCATTAT ACACCAAGAGCCAAGAAAGTAATTGAACTTTCAATGGATGAAGCAAGAAAGTTACACCATAACTTTGTAGGTACAGAACA CATATTACTAGGTTTAATTCGTGAAAATGAAGGCGTAGCTGCTCGCGTATTTGCTAATCTTGATTTAAATATTACGAAAG CGCGTGCCCAAGTCGTCAAAGCGCTAGGTAGTCCTGAAATGAGCAATAAAAATGCTACAGCAAATAAATCAAATAATACC CCTACATTAGATGGATTAGCACGTGATTTAACTGTCATTGCCAAAGATGGAACGTTAGATCCAGTTGTTGGTAGAGATAA AGAAATTACTCGTGTAATTGAAGTGTTAAGTCGTCGTACTAAAAACAATCCTGTACTAATTGGTGAACCCGGTGTAGGTA AAACTGCAATTGCAGAAGGTCTTGCTCAAGCTATTGTTAATAATGAAGTACCTGAGACACTTAAAGGTAAACGCGTGATG TCACTTGATATGGGAACAGTTGTAGCTGGTACTAAATATCGTGGTGAATTTGAAGAACGTTTGAAAAAGGTAATGGAAGA AATTCATCAAGCTGGTAACGTAATCTTATTCATTGATGAATTACACACATTAGTTGGTGCTGGTGGAGCTGAAGGCGCAA TCGATGCGTCAAATATATTAAAACCAGCATTAGCACGTGGTGAATTACAATGTATCGGTGCGACAACATTAGATGAATAT CGTAAAAACATCGAGAAAGATGCAGCGTTAGAACGTCGTTTCCAACCTATTCAAGTTGATGAACCAACAGTTGAAGACAC AATTGCAATTTTAAAAGGATTACGTGATCGTTATGAAGCGCATCACCGCATCAATATTTCAGATGAAGCACTTGAAGCGG CTGCTAAATTAAGTGATTGTTATGTATCAGATCGTTTCTTACCCGATAAAGCAATTGATTTAATTGATGAAGCAAGTTCA AAAGTAAGACTGAAAAGTCATACAACACCTAACAACTTGAAAGAAATTGAGCAAGAAATTGAAAAAGTAAAAAATGAAAA AGACGCAGCAGTTCATGCTCAAGAATTCGAGAATGCTGCTAATTTACGTGATAAACAAACTAAACTTGAAAAACAATATG AAGATGCCAAAAATGAGTGGAAAACAACTCAAGGTGATCAATCCACTTCTCTATCTAAAGAAGATATTGGTGAAGTCATT GCAGGTTGGACAGGTATACCACTTACAAAAATTAATGAAACTGAATCGGATCGATTATTAAATCTTGAACAAACGTTACA TGATAGAGTTATTGGCCAAAATGATGCTGTAACTTCTATTAGTAAAGCGGTACGCCGTGCTCGTGCAGGATTGAAAGATC CTAAACGTCCAATCGGTAGTTTTATCTTCTTAGGTCCTACAGGTGTAGGTAAAACAGAATTAGCTAGAGCATTAGCAGAA TCAATGTTTGGTGAAGAAGATGCAATGATTCGCGTTGATATGAGTGAGTTTATGGAAAAACATGCTGTGAGTCGTTTAGT TGGAGCGCCTCCAGGCTATGTAGGTCATGATGAAGGTGGCCAATTAACTGAGAAAGTAAGACGTAAACCATACTCAGTTA TCTTATTTGATGAAATCGAAAAGGCGCATCCAGATGTATTTAATATTCTATTGCAAGTTCTAGACGATGGTCATTTAACT GATACAAAAGGACGTCAAGTTGATTTCCGAAATACAGTGATTATCATGACTTCAAATGTCGGTGCACAAGAATTACAAGA TCAACGCTTTGCTGGTTTCGGTGGCGGTTCTGAAGGTCATGACTATGAAACAATTCGCAAGACTATGATGAAAGAATTGA AAAATTCATTCCGCCCAGAGTTCTTAAACCGTGTTGACGACATCATCGTATTCCATAAACTTTCTAAAGATGAATTGAAA GAAATCGTTACAATGATGGTTAATAAACTAACACAACGACTATCTGAGCAAGATATTAATATTGTTGTAACTGATAAAGC AAAAGAAAAAATTGCTGAAGAAGGCTATGATCCAGAATACGGTGCCCGTCCATTAATCAGAGCTATTCAAAAAACAGTTG AAGATAACTTGAGTGAATTAATCTTAGACGGTAACCAAATTGAAGGTAAAGAAGTTGTCATCGACCATGATGGTGATGAA TTTAAATATAATATCAATGAAAAAAATAATGGTATTTCAGATGAAGGCAATGAAGTAACTGAAACTGAAGCATAA Protein sequence : MLFGRLTERAQRVLAHAQEEAIRLNHSNIGTEHLLLGLMKEPEGIAAKVLESFNITEDKVIEEVEKLIGHGQDQTGTLHY TPRAKKVIELSMDEARKLHHNFVGTEHILLGLIRENEGVAARVFANLDLNITKARAQVVKALGSPEMSNKNATANKSNNT PTLDGLARDLTVIAKDGTLDPVVGRDKEITRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQAIVNNEVPETLKGKRVM SLDMGTVVAGTKYRGEFEERLKKVMEEIHQAGNVILFIDELHTLVGAGGAEGAIDASNILKPALARGELQCIGATTLDEY RKNIEKDAALERRFQPIQVDEPTVEDTIAILKGLRDRYEAHHRINISDEALEAAAKLSDCYVSDRFLPDKAIDLIDEASS KVRLKSHTTPNNLKEIEQEIEKVKNEKDAAVHAQEFENAANLRDKQTKLEKQYEDAKNEWKTTQGDQSTSLSKEDIGEVI AGWTGIPLTKINETESDRLLNLEQTLHDRVIGQNDAVTSISKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAE SMFGEEDAMIRVDMSEFMEKHAVSRLVGAPPGYVGHDEGGQLTEKVRRKPYSVILFDEIEKAHPDVFNILLQVLDDGHLT DTKGRQVDFRNTVIIMTSNVGAQELQDQRFAGFGGGSEGHDYETIRKTMMKELKNSFRPEFLNRVDDIIVFHKLSKDELK EIVTMMVNKLTQRLSEQDINIVVTDKAKEKIAEEGYDPEYGARPLIRAIQKTVEDNLSELILDGNQIEGKEVVIDHDGDE FKYNINEKNNGISDEGNEVTETEA |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
clpC | YP_005163377.1 | ATP-dependent Clp protease ATP-binding subunit | Not tested | Not named | Protein | 0.0 | 56 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
clpC | YP_254399.1 | endopeptidase Clp ATP-binding subunit C | VFG0079 | Protein | 0.0 | 71 |
clpC | YP_254399.1 | endopeptidase Clp ATP-binding subunit C | VFG0080 | Protein | 4e-164 | 53 |