Gene Information

Name : vraF (SH2233)
Accession : YP_254148.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Resistance
Product : ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 2268590 - 2269351 bp
Length : 762 bp
Strand : -
Note : -

DNA sequence : 
GTGGCAATATTACAGGCAAAGCAAATTGCCAAAACTTATGGAAATAAACAAACTGAACAAGAAGTTTTAAAAGATATAGA
TCTGTCAATTGAAGCGGGAGAGTTTGTAGCTATCATGGGGCCATCGGGATCAGGCAAGACAACGTTATTAAACGTGTTAA
GTTCAATTGACTATTTAACACATGGTTCTATTATTTTAGATGGTCAACAATTAGAGAAATTATCTAATAAAGCGTTGTCT
GAAATTAGAAAAAAAGATATTGGTTTTATTTTTCAAGAATATAATTTATTACATACGTTAACAGTTAAAGAAAACATCAT
GTTACCTTTATCAGTTCAAAAGTTAGATAAAAAAGAAATGAATGAACGCTATCAACGTATTACGCAGGCTTTAAATATTT
TTGAAATTAGTGATAAATATCCATCAGACATTTCTGGTGGACAGCGACAAAGAACATCCGCAGCGCGTGCATTTATTACG
TATCCTAAGATTATTTTCGCGGATGAGCCAACAGGGGCACTTGATTCTAAAAATACTCGCGATTTATTACAACGTTTTCA
AAAAATCAATGAACTTTATAACGCAACGATAGTAATGGTAACGCATGATCCTTTGGCAGCAAGCTTCTCAGAGCGTGTGA
TTATGTTAAAAGACGGGCAGGTATTTACTGAAATTTATCAAGGTGAAGATGATAAAAATGTCTTTCACAAAGAGATCCTA
CGTGCGCAAAGTATATTAGGTGGCATGATGTATGAGTTTTAG

Protein sequence : 
MAILQAKQIAKTYGNKQTEQEVLKDIDLSIEAGEFVAIMGPSGSGKTTLLNVLSSIDYLTHGSIILDGQQLEKLSNKALS
EIRKKDIGFIFQEYNLLHTLTVKENIMLPLSVQKLDKKEMNERYQRITQALNIFEISDKYPSDISGGQRQRTSAARAFIT
YPKIIFADEPTGALDSKNTRDLLQRFQKINELYNATIVMVTHDPLAASFSERVIMLKDGQVFTEIYQGEDDKNVFHKEIL
RAQSILGGMMYEF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-34 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-36 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-36 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
vraF YP_254148.1 ABC transporter ATPase NC_012469.1.7686878. Protein 2e-38 42