Gene Information

Name : SH2172 (SH2172)
Accession : YP_254087.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1125
EC number : -
Position : 2206479 - 2207447 bp
Length : 969 bp
Strand : -
Note : hypothetical protein, similar to glycine betaine/carnitine/choline ABC transporter (ATP-binding protein)

DNA sequence : 
ATGATTGAATTTAAAAACGTAACAAAACGTTATGGAGATAATGTGGCAGTTGATGATGTAAGTTTCAAAATAAATGAGGG
TGAGTTTTTTGTAATTATAGGTCCATCAGGGTGTGGTAAAACAACTACTTTGAAGATGATTAATAGGCTTATTCCGTTAA
GTGAAGGTTATATTTATTTTAAAGATAAACCTATAAGTGATTATCCTGTTTATGAAATGAGATGGGATATTGGATATGTG
TTGCAACAAATCGCACTTTTCCCTCATATGACCATTAAAGAGAATATTGCACAGGTTCCACAGATGAAAAAATGGAAAGA
TAAAGATATAGATCAACGTGTTGACGAATTACTTGAAATGGTTGGTTTAGAACCTGAAAAATATCGAGATCGTAAACCAG
ATGAATTATCAGGTGGCCAACGACAGAGAGTTGGTGTAGTAAGAGCATTAGCTGTAGATCCACCAGTTATATTGATGGAT
GAACCTTTTAGTGCACTGGATCCAATCAGTCGCGAGAAACTACAAGATGATTTAATAGAACTACAAACTAAAATCAAAAA
GACAATTGTATTTGTAACGCATGATATTCAAGAAGCAATGAAGCTAGGTGATCGAATTTGTTTACTTAATAATGGGCATG
TTGAACAAATAGATACACCACAAGCATTCCGTAATCAACCTAAAAATAAATTTGTAGAAGAGTTTATGGGTAGCCATTTA
GAACAAGATAAAGAAAGCTTACAGTTGAAAGATCTTAATATTACTTCGCCACTCACAGAAAAAGAAACACACCATGATTA
TCCTGAAATCAATAGTGATGCGCAATTACGTTCAGTTTATTCTACATTAGCCCAACATGAAGCGGTTATTGTTAATGATG
TATCAACCTCCACGCAATCACTCTTAAAACGTGAAGATATCTTTAAGTATTTATCTGAGATAGACCATGACAAGGAGGTT
AAAGCATGA

Protein sequence : 
MIEFKNVTKRYGDNVAVDDVSFKINEGEFFVIIGPSGCGKTTTLKMINRLIPLSEGYIYFKDKPISDYPVYEMRWDIGYV
LQQIALFPHMTIKENIAQVPQMKKWKDKDIDQRVDELLEMVGLEPEKYRDRKPDELSGGQRQRVGVVRALAVDPPVILMD
EPFSALDPISREKLQDDLIELQTKIKKTIVFVTHDIQEAMKLGDRICLLNNGHVEQIDTPQAFRNQPKNKFVEEFMGSHL
EQDKESLQLKDLNITSPLTEKETHHDYPEINSDAQLRSVYSTLAQHEAVIVNDVSTSTQSLLKREDIFKYLSEIDHDKEV
KA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-48 47
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 1e-48 47