Gene Information

Name : SH2088 (SH2088)
Accession : YP_254003.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2124540 - 2125130 bp
Length : 591 bp
Strand : -
Note : no similarity

DNA sequence :
TTGAAAACAGCTAAATACTTTGATGAATACAATGAATATGTGACAGGTCAAAGAGAGAATATCAATAAACTTGAAAAGGA
ACGTCAAGAACTCACACAACGAATTAAAGAGGATAAAGTTAAATATAAAGAACTAATTGCAAACTCACAAGATGATGAGG
CTGATAAACTTTATACCACATTTGATAGTAATGAGAAGAAATTGAAAGCATTAGAGAAACGCTTATCAACTAAAAAAGAA
GTGTTTGATGAAGCTAGACGTAAAAAAGCGATTGAATTAATCAAGCACCAGGCAGATCTTCCCTACTTATATCAAGAAGA
CAAAAAACGCATATTAGCGAAGTTTGAGCCGATTATCGAAGAATTTAATAAAGTGATAGATGAAGTTGATGATTTAAACG
CCAGATATAAAGATGAGTTCATGCGCTACACTAATCCATATCATATAGAAAATTTCGACGAAGATGATGAAGTAAAAAGG
GAGTTGCGAAATCATTTCAGAGATGTTTTATATAGTCCATATATTACAAGTATAGAATTACCGTTTACAGATAAATTCAA
AGATAAACTTAAATTTAGAGGTGATAAATAA

Protein sequence :
MKTAKYFDEYNEYVTGQRENINKLEKERQELTQRIKEDKVKYKELIANSQDDEADKLYTTFDSNEKKLKALEKRLSTKKE
VFDEARRKKAIELIKHQADLPYLYQEDKKRILAKFEPIIEEFNKVIDEVDDLNARYKDEFMRYTNPYHIENFDEDDEVKR
ELRNHFRDVLYSPYITSIELPFTDKFKDKLKFRGDK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP55239.1 unknown Not tested SaPIbov2 Protein 1e-50 55
SA1824 NP_375125.1 hypothetical protein Not tested vSa4 Protein 5e-39 46
unnamed AAC28958.2 - Not tested SaPI1 Protein 3e-39 46
SAV0796 NP_371320.1 hypothetical protein Not tested vSa3 Protein 5e-39 46
SAV2017 NP_372541.1 hypothetical protein Not tested vSa4 Protein 5e-39 46
unnamed AET14342.1 hypothetical protein Not tested SaPI68111 Protein 1e-38 45
unnamed AAL04131.1 unknown Not tested SaPI3 Protein 1e-38 45
SACOL0902 YP_185773.1 pathogenicity island protein Not tested vSa1 Protein 1e-38 45
unnamed ABJ97293.1 hypothetical protein Not tested SaPI2 Protein 1e-38 45
SAAV_0801 YP_003281724.1 pathogenicity island protein ORF9 Not tested SaPIAv Protein 6e-38 44
SAB1898c YP_417357.1 mobile element-associated protein Not tested SaPIbov2 Protein 1e-38 44
unnamed AAG29606.1 Orf9 Not tested SaPIbov Protein 7e-39 44
SAB0355 YP_415857.1 pathogenicity island protein Not tested SaPIbov Protein 1e-38 44