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Name : tnp (SH1898) Accession : YP_253813.1 Strain : Staphylococcus haemolyticus JCSC1435 Genome accession: NC_007168 Putative virulence/resistance : Unknown Product : IS1272 transposase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG3666 EC number : - Position : 1941999 - 1943699 bp Length : 1701 bp Strand : + Note : - DNA sequence : ATGTATAAAAATTATAACATGACTCAACTTACTCTACCAATGGAAACTTCAGTTCTTATCCCCACAAATGATATTTCACG ACATGTAAATGATATTGTTGAAACAATTCCTGACAATGAATTCGACGAATTCAGACATCACCGTGGTGCAACTTCGTACC ATCCTAAAATGATGTTAAAAGTGATTCTATATGCCTACACACAATCTGTATTCTCAGGTCGTAAAATAGAAAAAATGCTT AATGATAGCATCCGAATGATGTGGCTATCACAAAATCAAAAACCTTCTTATAAAACAATTAATCGATTTAGAGTAAATCC AAAAGTAGATGCTTTATTAGAATCTTTATTTATTCAATTTTACAGTCAGTGTGTAAAACAAAATCTTATAGATGATAAAG CTATTTTTATTGATGGTACAAAAATTGAAGCAAATGCCAATCGATATACATTTGTATGGAAAAAGAGTATTCAAAACCAT GAATCAAAGATGAATGAGGATTCTAAAGCCCTCTACCATGAATTGGTAACCAATAAAATCATACCGGAAATTAAAGAAGA TCATGATAATGAATTAACAAAAGAAGAAATAGATTTGATTGGTAGTCACTTAGATAAAGAAATCGAAGATTTAAACCAAC ATATCAACAATGAAAAATGTACTAAAACAAGAAAACAAATACGTCTCAAAAGAACTAAAATCAAAAAATACAAAAAGCAA ATCAATGATTATTTTGAGCGAAAGTATCGATACGAATTTCAAAAATCTATTTTAAAGGATAGAAATAGTTATTCTAAGAC AGATCATGATGCGACATTTATGAGAATGAAAGAAGATCACATGAAAAATGGACAACTTAAGCCAGGGTATAATTTACAAA TAGCGACAAATTCCCAATTTGTTTTATCTTATAATGTGTATCAAAATCCAACGGATACTAGAACGATGATTCCATTTTTA AATTCAATTCAAGAGACCTACGGTCATTTACCTGAATATATTGTAGCTGATGCAGGTTATGGTAGTGAATCAAATTATAA GGCAATTATAGATGACTTTAATCGAACGCCACTCATAACATATGGAATGTTTATAAAAGATAAAACTAAAAAATATAAAA GTGACATCTTTAATACTCAAAATTGGAACTATGACGAAATTAATGACGAATTCATTTGTCCGAATAATAAACGGCTAGGT TTTAAAAGATATGCCTATCGTCATGATAAGTATGGTTATAAGCGAGACTTCAAATTATATGAATGTGATGATTGTTCAGA ATGTCCTCTGAAAAATCAATGTATGAACTTCAATTCAAAAACAAACAAAAAAATAATGAAGAATTATAACTGGGAATATT TTAAATCCCAAATTAACAAAAAGCTTTCAGAACCAGAAACAAAAAATATCTACAGTCAAAGAAAAATTGATGTGGAACCT GTTTTTGGATTTATGAAGGCTATTTTGGGTTTCACTCGGATGTCTGTCCGAGGACTCAATAAAGTCAAAAGAGAACTTGG TTTTGTATTAATGGCACTTAATATAAGAAAAGTAGTAGCTCAACGAGCTGAAAATAATCAAAAAATTTATAAAAAAGACA ATTTCTATATTATTTCAATAGAAATTGTCTTTTTTTCACTTATCCAAGAACTTTATGTCCCGGACTCTTATTCATTTATA ATTTATACAAAATCTTATTAA Protein sequence : MYKNYNMTQLTLPMETSVLIPTNDISRHVNDIVETIPDNEFDEFRHHRGATSYHPKMMLKVILYAYTQSVFSGRKIEKML NDSIRMMWLSQNQKPSYKTINRFRVNPKVDALLESLFIQFYSQCVKQNLIDDKAIFIDGTKIEANANRYTFVWKKSIQNH ESKMNEDSKALYHELVTNKIIPEIKEDHDNELTKEEIDLIGSHLDKEIEDLNQHINNEKCTKTRKQIRLKRTKIKKYKKQ INDYFERKYRYEFQKSILKDRNSYSKTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSQFVLSYNVYQNPTDTRTMIPFL NSIQETYGHLPEYIVADAGYGSESNYKAIIDDFNRTPLITYGMFIKDKTKKYKSDIFNTQNWNYDEINDEFICPNNKRLG FKRYAYRHDKYGYKRDFKLYECDDCSECPLKNQCMNFNSKTNKKIMKNYNWEYFKSQINKKLSEPETKNIYSQRKIDVEP VFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAENNQKIYKKDNFYIISIEIVFFSLIQELYVPDSYSFI IYTKSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tnp | YP_254534.1 | IS1272 transposase | Not tested | ¥ðSh2 | Protein | 0.0 | 99 |
| MW0034 | NP_644849.1 | hypothetical protein | Not tested | Type-IV SCCmec | Protein | 0.0 | 97 |
| unnamed | BAA86649.1 | hypothetical protein | Not tested | Type-I SCCmec | Protein | 0.0 | 97 |
| SAUSA300_0034 | YP_492755.1 | IS1272, transposase | Not tested | Type-IV SCCmec | Protein | 0.0 | 97 |
| SACOL0036 | YP_184947.1 | IS1272 transposase | Not tested | Type-I SCCmec | Protein | 0.0 | 97 |
| SAMSHR1132_00350 | YP_005324559.1 | putative transposase | Not tested | Type-IIIinv SCCmec | Protein | 0.0 | 97 |
| SE0076 | NP_763631.1 | transposase | Not tested | SCCpbp4 | Protein | 0.0 | 91 |
