Gene Information

Name : SH1490 (SH1490)
Accession : YP_253405.1
Strain : Staphylococcus haemolyticus JCSC1435
Genome accession: NC_007168
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1528967 - 1529626 bp
Length : 660 bp
Strand : +
Note : hypothetical protein, similar to response regulator ArlR [truncated]

DNA sequence : 
ATGACTAATATACTTATTGTGGAAGATGAACAAAATTTAGCCCGCTTCTTAGAACTAGAACTAACTCATGATAATTATAG
TGTAGATATAGAATATGAAGGACAGGCAGGGCTCGATAAAGCACTAAGTAATAATTACGATTTAATTATATTAGATTTAA
TGTTACCAAACATAAATGGCTTAGAAATATGTCGCCGTGTCAGACAGGAACAATCAACGCCTATCATTATTATTACGGCT
AAAAGCGATACATATGACAAAGTGACCGGTTTAGATTATGGTGCTGATGATTATATAGTAAAACCCTTTGAAATTGAAGA
ACTATTTGCACGCATTCGTGCAGTACTCCGTCGTCAACCTCAAAAGGATATCATTGATATCAATGGCATTAAAATAGACG
TCGATGCTTTTAATGTCACAATTAATGGAGAACAGTTAGATTTCACTAAAACTGAATATGACTTACTTTATTTATTAGCA
ACTAACAGAAACCGTGTGCTACAAAGAGAACAGATCTTAGATCATGTTTGGGGCTATGACAGTGAAGTTGAGACGAATGT
CGTAGATGTTTATATTCGATATTTACGCAACAAACTTAAACCTTATGGTAAAGATAAAACGATTGAAACCGTTCGTGGTG
TTGGGTACGTGATCAGATGA

Protein sequence : 
MTNILIVEDEQNLARFLELELTHDNYSVDIEYEGQAGLDKALSNNYDLIILDLMLPNINGLEICRRVRQEQSTPIIIITA
KSDTYDKVTGLDYGADDYIVKPFEIEELFARIRAVLRRQPQKDIIDINGIKIDVDAFNVTINGEQLDFTKTEYDLLYLLA
TNRNRVLQREQILDHVWGYDSEVETNVVDVYIRYLRNKLKPYGKDKTIETVRGVGYVIR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-34 43
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 3e-34 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SH1490 YP_253405.1 hypothetical protein NC_003923.1003417.p0 Protein 2e-83 84
SH1490 YP_253405.1 hypothetical protein NC_013450.8614146.p0 Protein 2e-83 84
SH1490 YP_253405.1 hypothetical protein NC_002951.3238224.p0 Protein 2e-83 84
SH1490 YP_253405.1 hypothetical protein NC_007793.3914065.p0 Protein 2e-83 84
SH1490 YP_253405.1 hypothetical protein NC_002758.1121390.p0 Protein 2e-83 84
SH1490 YP_253405.1 hypothetical protein NC_010079.5776364.p0 Protein 2e-83 84
SH1490 YP_253405.1 hypothetical protein NC_002952.2859858.p0 Protein 2e-83 84
SH1490 YP_253405.1 hypothetical protein NC_007622.3794948.p0 Protein 2e-83 84
SH1490 YP_253405.1 hypothetical protein AE015929.1.gene1106. Protein 7e-77 83
SH1490 YP_253405.1 hypothetical protein HE999704.1.gene1528. Protein 1e-47 55
SH1490 YP_253405.1 hypothetical protein AE000516.2.gene3505. Protein 3e-31 43
SH1490 YP_253405.1 hypothetical protein BAC0308 Protein 2e-33 42
SH1490 YP_253405.1 hypothetical protein BAC0197 Protein 2e-33 42
SH1490 YP_253405.1 hypothetical protein BAC0125 Protein 1e-35 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SH1490 YP_253405.1 hypothetical protein VFG0596 Protein 4e-35 43