Gene Information

Name : jk0399 (jk0399)
Accession : YP_250174.1
Strain : Corynebacterium jeikeium K411
Genome accession: NC_007164
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 478248 - 479000 bp
Length : 753 bp
Strand : +
Note : -

DNA sequence : 
ATGAACCACTCAGAGAACAAGCAATTGCCCAGCGCCGCTCGGGCCGAGGATGTAAGGAAAATCTACGGTCACGGAGAAAC
TGAGGTTAAGGCACTCGACGGAATCTCCATCGACTTCCACGACGGGCAGTTCACCGCCATCATGGGGCCTAGCGGTTCCG
GCAAATCCACACTTATGCATTGCATGGCTGGGCTTGATTCCATTTCTAGTGGTAAGGCATACATCGGCGATACCGACATC
TCCACGCTTAACGACAAGCAGATTACCGCTCTACGCCGTGACCGCCTGGGCTTTATCTTCCAGTCTTTCAACTTGGTCCC
CACCCTGACCGCAAAGGAAAACATCACCCTTCCGCTGGACATCGCAGGCCGCAAGGTCAACCAAGACTGGTTTGACGAAG
TTGTCGTACGCCTCGGGCTAAAAGACCGTCTAGATCACCGTCCGTCCGAGCTTTCAGGTGGTCAACAGCAGCGGGTTGCC
TGCGCTCGCGCTTTGGTTGCTCAACCGGAGATCATCTTTGGTGACGAGCCAACTGGCAACCTCGATTCCAACAGTTCCGC
AGAAGTACTCAGTATTCTGCGCAACGCCGTTGATAGGGACAACCAGACAGTTGTCATCGTTACCCACGATCCGAAGGCTG
CCTCCTACGCAGACCGTGTTGTTTTCCTAGCCGACGGACGAATCGCAGATGAGCTAGAAAAGCCTGACGTGGACGCCGTT
CTGGGCGTCATGGGCAAACTGGAGGACCACTAG

Protein sequence : 
MNHSENKQLPSAARAEDVRKIYGHGETEVKALDGISIDFHDGQFTAIMGPSGSGKSTLMHCMAGLDSISSGKAYIGDTDI
STLNDKQITALRRDRLGFIFQSFNLVPTLTAKENITLPLDIAGRKVNQDWFDEVVVRLGLKDRLDHRPSELSGGQQQRVA
CARALVAQPEIIFGDEPTGNLDSNSSAEVLSILRNAVDRDNQTVVIVTHDPKAASYADRVVFLADGRIADELEKPDVDAV
LGVMGKLEDH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-39 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-42 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-42 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-42 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
jk0399 YP_250174.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-49 47
jk0399 YP_250174.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 2e-43 45
jk0399 YP_250174.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-38 43
jk0399 YP_250174.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 3e-44 42