Gene Information

Name : tnp3504j3 (jk0390)
Accession : YP_250162.1
Strain : Corynebacterium jeikeium K411
Genome accession: NC_007164
Putative virulence/resistance : Unknown
Product : transposase IS3504j
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 464217 - 464861 bp
Length : 645 bp
Strand : +
Note : -

DNA sequence :
ATGCGTCTAGCCGGTGTATCAGGCAAAGGCAAAGGCCGCTCGCCTATGACCACTCGCACACCTCAAAGGCCGGATTTGCG
CCCGGACTTGGTGGAGCGAGAATTCAAAGCCGAAGGCCCGAACAAGCTGTGGGTGGCTGACATTACCTACGTTCGCACGA
AGAAAGGCTTTGTGTACGCCGCATTTGTCACCGATGTTTACTCCCGACGGATCGTTGGGTGGGCGTTATCAGATTCCATG
CGCACCGAAGCGTTGCCACTGCAAGCTCTCAACCAGGCGATCGCGTGTGCTGAAGAAACAACAAGTCTCATTCACCATTC
AGATCACGGCTCGCAGTATGTCAGCGTTGTCTACAACGAGCGTCTTGCCCAGCACGGGATTGCCGCTTCCACCGGAACTG
TCGGGGATTCCTATGACAATGCTCTGGCTGAAAACGTTAACGGCTCCTACAAAAACGAGCTGATCCATACTCGCAGGTGG
AATGACGTTGTCGAGGTAGAAATCGCGACGTTCGAGTGGGTGTCATGGTGGAACGAGACGAGGCTTCACCAAAGCTTGGG
ATACCGAACCCCAGTCGAAGTGGAAACCGAATTTTGGGAGCAGCACCCGCCGCAAGCAATAATAGAAATCAAGGCAAATG
CCTAG

Protein sequence :
MRLAGVSGKGKGRSPMTTRTPQRPDLRPDLVEREFKAEGPNKLWVADITYVRTKKGFVYAAFVTDVYSRRIVGWALSDSM
RTEALPLQALNQAIACAEETTSLIHHSDHGSQYVSVVYNERLAQHGIAASTGTVGDSYDNALAENVNGSYKNELIHTRRW
NDVVEVEIATFEWVSWWNETRLHQSLGYRTPVEVETEFWEQHPPQAIIEIKANA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3594 NP_755469.1 transposase Not tested PAI I CFT073 Protein 9e-32 53
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 7e-37 49
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 2e-37 49
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 3e-37 48
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 2e-37 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnp3504j3 YP_250162.1 transposase IS3504j VFG1715 Protein 3e-32 53