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Name : lysS (jk0294) Accession : YP_250064.1 Strain : Corynebacterium jeikeium K411 Genome accession: NC_007164 Putative virulence/resistance : Unknown Product : lysyl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG1190 EC number : 6.1.1.6 Position : 357265 - 358920 bp Length : 1656 bp Strand : + Note : class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA DNA sequence : ATGCCTCAATCGATTACCTGTCCGCCCCATGCGCTAGGCTTTGTAAGCGTGACTGACGCAGCAAATACCCCCGCACAAGA CCTGCCCGAACAGCTACGCATCCGCCGTGAAAAGCGGCAGCGCATCCTCGAATCCGGCAAGGACGCTTACCCGGTAGAGG TGCCACGCACCCACTCCCTGGCCGAGGTGCGCGCAAAGTGGGCAGTGAAGAAGACTGACGGTGAAACTGAAGAGCAGCCG GTTGAGGCAGAGGGCGTCACTTACCTCGCCGCAGGCGACGAAACCCAGGACGTAGTGAGCGTGACCGGGCGCCTGATCTT CATGCGCAACACCGGCAAGCTTTGCTTCGCCACCCTGCAGGATGGCGACGGGACGCAGCTGCAGGCCATGCTCTCCCTGG CGGAGGTCGGCGAGGACGCACTCGCGGCCTGGAAGGCTGACGTGGACCTCGGCGACTTCATCGGTGTGACCGGTCGCGTG ATCGCTTCCCGCCGCGGCGAGCTATCCGTCATGGCCAGCGAGTGGGTCATGGCTGCCAAGGCCCTGCGTCCGCTGCCCGT GGCGTTCGCAGAAATGAACGAAGAAACTCGCGTGCGTCAGCGCTACAACGACCTGATCGTGCGCGAGGAGGCCCGCAAGA ATGCAATGACGCGCGTGAAGGTCATCCGCGCGCTGCGCGACTACATGGAGGGCGAGGGCTTCGTAGAGATCGAAACCCCA ATGCTGCAGACTCTGCACGGTGGCGCGGCGGCTCGACCGTTCGTCACGCACTCCAACGCGCTGGACATCGACCTGTACCT GCGAATCGCGCCGGAGCTGTTCCTGAAGCGCGCCGTGGTGGGCGGCATCGACCGCGTCTTCGAGATCAACCGCAACTTCC GTAACGAGGGCGTGGACAAGTCCCACTCCCCGGAGTTCGCAATGCTGGAGACCTACGCCGCGTGGGGTGACTACGACGAC TGTGCCCGCACCACCCGCGAATCCATCCAGTACATCGTGGACCAGCTAACCAAGGGCACCGACCTGGAGGGCACTGGCAA GGTGCGTCTCGCCGACGGCACCGAGTTCGACTTCGGCGGGGAGTGGAAGGAAATCGAGATGTACCCCTCGCTGAACGAGG CACTTGCGCGCAAGTACCCCGGCCAGCCAGAGGTGACGATCGACTCCACCGTTGAGGAGCTCAAGGAAATCGCTAAGGTC ATTGGCCTGGACGTTCCCGCTAAGGGCGGCTGGGGTCACGGCAAGCTGGTGGAGGAGATCTGGGAGGTCTTGTGCGAGGA CCAGCTGGAAGGCCCCATCTTCGTGCGTAACTTCCCCGTAGAGACCTCCCCGCTGACCCGCCAGCACCGCAGCAAGCCGG GTGTGACAGAGAAGTGGGATCTGTACGTCCGCGGATTCGAGCTGGCCACCGGCTACTCCGAGCTGATCGACCCGGTTATT CAGCGCGAGCGCTTTGAGGATCAGGCACGCCTGGCGGCCAATGGCGATGATGAAGCCATGCGCCTGGACGAGGACTTCCT GGCTGCCATGGAGCAGGGCATGCCGCCGACAGCCGGCACTGGCATGGGTATCGACCGACTGCTGATGGCCTTGACCGGTC TGGGTATCCGCGAGACCGTGCTGTTCCCGATCGTGAAGCCGGAGCGCGATAACTAG Protein sequence : MPQSITCPPHALGFVSVTDAANTPAQDLPEQLRIRREKRQRILESGKDAYPVEVPRTHSLAEVRAKWAVKKTDGETEEQP VEAEGVTYLAAGDETQDVVSVTGRLIFMRNTGKLCFATLQDGDGTQLQAMLSLAEVGEDALAAWKADVDLGDFIGVTGRV IASRRGELSVMASEWVMAAKALRPLPVAFAEMNEETRVRQRYNDLIVREEARKNAMTRVKVIRALRDYMEGEGFVEIETP MLQTLHGGAAARPFVTHSNALDIDLYLRIAPELFLKRAVVGGIDRVFEINRNFRNEGVDKSHSPEFAMLETYAAWGDYDD CARTTRESIQYIVDQLTKGTDLEGTGKVRLADGTEFDFGGEWKEIEMYPSLNEALARKYPGQPEVTIDSTVEELKEIAKV IGLDVPAKGGWGHGKLVEEIWEVLCEDQLEGPIFVRNFPVETSPLTRQHRSKPGVTEKWDLYVRGFELATGYSELIDPVI QRERFEDQARLAANGDDEAMRLDEDFLAAMEQGMPPTAGTGMGIDRLLMALTGLGIRETVLFPIVKPERDN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| lysS | YP_005163386.1 | lysyl-tRNA synthetase | Not tested | Not named | Protein | 0.0 | 75 |
