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Name : sigC (jk1995) Accession : YP_251795.1 Strain : Corynebacterium jeikeium K411 Genome accession: NC_007164 Putative virulence/resistance : Unknown Product : RNA polymerase sigma factor Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 2325644 - 2326261 bp Length : 618 bp Strand : + Note : Bacteria have multiple sigma factors which are active under specific conditions; the sigma factor binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate DNA sequence : ATGACCAGCCAGGCAACCAGCAGTCAGGCGCACGATGCCGCTGTGACCGACCTCGCCCTGCGCGCCGCCAGCGGCGACCG CCAGGCGTTGACCGAGTTCATTTCCGCCACGCACGACGACGTGTGGCGCCTGCTGGCCCACCTGGCCGATACCGACCGTG CGGACGACCTCACGCAGGAGACCTACCTGCGCGTACTAAGCGCCCTGCCGCGCTTCGCCGCCCGTTCCACGGCCCGCACC TGGATCCTCTCCCTCGCCCGCCGCGTGTGGGTCGATAGCGTACGCCACGACATGGCCCGCCCGCGCAGCTCCGCCACGGA GATTGAGGACGCCACCAGCGCCACCCCCGCCGCCGAAACCACTGGCGGGCAAAGCTGGGCCGAGTGGGTGGACACTCGCG CCCTCATCGACCAGCTGGAGGAGGAACGCCGCGAGGCTCTGATCCTCACGCAGGTGCTGGGCTACACCTACGCCGAGGCT GCGAAGATCGCTAACGTCCGCGTGGGCACGATCCGCTCCCGCGTTGCCCGCGCCCGCGCCGACTTGGTTGAGATGGCAGG CGAGGGACAAGGTGGCGTCACAAAGAAGAACAACAAGCGCCGCTTCGGCGTAGCCTAA Protein sequence : MTSQATSSQAHDAAVTDLALRAASGDRQALTEFISATHDDVWRLLAHLADTDRADDLTQETYLRVLSALPRFAARSTART WILSLARRVWVDSVRHDMARPRSSATEIEDATSATPAAETTGGQSWAEWVDTRALIDQLEEERREALILTQVLGYTYAEA AKIANVRVGTIRSRVARARADLVEMAGEGQGGVTKKNNKRRFGVA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigC | YP_005126716.1 | ECF-family sigma factor C | Not tested | Not named | Protein | 2e-52 | 70 |
