Gene Information

Name : fepB (jk1816)
Accession : YP_251611.1
Strain : Corynebacterium jeikeium K411
Genome accession: NC_007164
Putative virulence/resistance : Virulence
Product : iron ABC transport system, permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 2119732 - 2120757 bp
Length : 1026 bp
Strand : +
Note : -

DNA sequence : 
ATGAGTGTGCGCACCAGCCGCCTACTGGGTCTGGGGGTACTACTCCTACTGGTCGTCAGTGGCACGATCTGCAGTTTCCT
GTACGGCGCCCGTTCCATCCCCGCAGAGGACGTGTGGGCTGCACTTCGGGATCTCCCGGCTACCAGTAGCTCCCCGGAGG
AGGTTCCAGTCAACCAACGCGTGGTCGCCGAGCTGCGCCTGCCACGCACCATATTGGCCATTATCGTGGGCGCGGCACTA
GGCGTAGCCGGCGCCCTAATCCAGGGACATACCCGCAATCCCCTGGCGGATCCGGGGATACTGGGAATCAGTTCCGGCGC
GGCACTGAGCGTGGTGGCCAGCTACGCCCTGTTGGGCATCAGCGCGCCTTGGGCGACTGCGGTGGTTGCCTTCCTTGGTG
CAATCGCAGCGACGGCGCTGGTCTTCGGCCTAGCTTCCGCGGGCAGAGCCACGGTAAATCCCCTGACCCTCGTGCTGGGC
GGAGCCGCGCTGTCGGCAGTGCTAAGTGCCATCACGAGCGCCTTCGTTCTCACAAGTGAAAACAACCTGGATAGGATGCG
CTTCTGGACCGTCGGTTCCCTAGCGGGCCGGGATATGAACATCGCGCTCAGCGTCTTGCCGTTTGTGGTTCTGGGGTTGA
TCCTGGCCTTTGCCACGGGCCCGCAGCTGAACATCCTAAATCTGGGCGACGACGTGGCTGCTGGCTTAGGTATCAACACT
GCGGCCGCGCGACTAGGTGGCATGGGCATCATCGCACTGCTGGCAGGTGCAGCCACTGCCGCTGCAGGACCGCTGGGCTT
CATCGGCCTGGTGGTACCCCATATCGTCCGAGCCCTCACCGGCCCGGATTACAAGTGGATTCTGCCGTACTCCGCGCTAG
CCGGTGCAGCACTACTTCTTTACGCGGACGTGGTGGGGCGCCTCATCGCCCGGCCCGGCGAGCTCCAGGTGGGCATTGTG
CTGGCGTTCGTGGGTGCACCGTTCTTCATCGTCTTGATTTACCGAAAGAAGGTGGCGACGCTCTGA

Protein sequence : 
MSVRTSRLLGLGVLLLLVVSGTICSFLYGARSIPAEDVWAALRDLPATSSSPEEVPVNQRVVAELRLPRTILAIIVGAAL
GVAGALIQGHTRNPLADPGILGISSGAALSVVASYALLGISAPWATAVVAFLGAIAATALVFGLASAGRATVNPLTLVLG
GAALSAVLSAITSAFVLTSENNLDRMRFWTVGSLAGRDMNIALSVLPFVVLGLILAFATGPQLNILNLGDDVAAGLGINT
AAARLGGMGIIALLAGAATAAAGPLGFIGLVVPHIVRALTGPDYKWILPYSALAGAALLLYADVVGRLIARPGELQVGIV
LAFVGAPFFIVLIYRKKVATL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 3e-17 43
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 3e-17 43
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 3e-17 43
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 3e-17 43
SPN23F_09540 YP_002510937.1 ferric siderophore ABC transporter permease Virulence PPI-1 Protein 6e-22 42
SP_1033 NP_345508.1 iron ABC transporter permease Virulence PPI-1 Protein 6e-22 42
fecD AAL08452.1 FecD Virulence SRL Protein 7e-10 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepB YP_251611.1 iron ABC transport system, permease BAC0163 Protein 5e-10 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepB YP_251611.1 iron ABC transport system, permease VFG0926 Protein 3e-17 43
fepB YP_251611.1 iron ABC transport system, permease VFG1043 Protein 4e-10 41