Gene Information

Name : tnp3504g2 (jk1589)
Accession : YP_251380.1
Strain : Corynebacterium jeikeium K411
Genome accession: NC_007164
Putative virulence/resistance : Unknown
Product : transposase IS3504g
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2801
EC number : -
Position : 1860925 - 1861845 bp
Length : 921 bp
Strand : +
Note : -

DNA sequence :
ATGATCCGGTTCATCGATGAATACCGGAATCGTTTCTCTGTCGAGTTCATCTGTAAGACGTTGAAGGATAACCGGGCTGG
TGGGTTCATCACCTCGCGTGGGTATCGCCAGTCCAGGGCCCGTGGATTAAGTGCTCGCTGCCTTCGTGATGCTGTGCTGG
TTGAACGCATTGGTGCTATTCATCGGGATAATTACGGTGTCTACGGTGTACGGAAAATGTGGCATGCTCTTCATCGTGAC
GGAATCGATATCGGTCGTGAACAAACCGCGCGGCTGATGCGTCTAGCCGGTGTATCAGGCAAAGGCAAAGGCCGCTCGCC
TATGACCACTCGCACACCTCAAAGGCCGGATTTGCGCCCGGACTTGGTGGAGCGAGAATTCAAAGCCGAAGGCCCGAACA
AGCTGTGGGTGGCTGACATTACCTACGTTCGCACGAAGAAAGGCTTTGTGTACGCCGCATTTGTCACCGATGTTTACTCC
CGACGGATCGTTGGGTGGGCGTTATCAGATTCCATGCGCACCGAAGCGTTGCCACTGCAAGCTCTCAACCAGGCGATCGC
GTGTGCTGAAGAAACAACAAGTCTCATTCACCATTCAGATCACGGCTCGCAGTATGTCAGCGTTGTCTACAACGAGCGTC
TTGCCCAGCACGGGATTGCCGCTTCCACCGGAACTGTCGGGGATTCCTATGACAATGCTCTGGCTGAAAACGTTAACGGC
TCCTACAAAAACGAGCTGATCCATACTCGCAGGTGGAATGACGTTGTCGAGGTAGAAATCGCGACGTTCGAGTGGGTGTC
ATGGTGGAACGAGACGAGGCTTCACCAAAGCTTGGGATACCGAACCCCAGTCGAAGTGGAAACCGAATTTTGGGAGCAGC
ACCCGCCGCAAGCAATAATAGAAATCAAGGCAAATGCCTAG

Protein sequence :
MIRFIDEYRNRFSVEFICKTLKDNRAGGFITSRGYRQSRARGLSARCLRDAVLVERIGAIHRDNYGVYGVRKMWHALHRD
GIDIGREQTARLMRLAGVSGKGKGRSPMTTRTPQRPDLRPDLVEREFKAEGPNKLWVADITYVRTKKGFVYAAFVTDVYS
RRIVGWALSDSMRTEALPLQALNQAIACAEETTSLIHHSDHGSQYVSVVYNERLAQHGIAASTGTVGDSYDNALAENVNG
SYKNELIHTRRWNDVVEVEIATFEWVSWWNETRLHQSLGYRTPVEVETEFWEQHPPQAIIEIKANA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-25 YP_001800853.1 transposase for insertion sequence Not tested Not named Protein 1e-120 80
CDCE8392_1958 YP_005134489.1 transposase-like protein Not tested Not named Protein 4e-63 55
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 1e-45 48
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 2e-47 44
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 2e-47 44
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 4e-47 44
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 2e-47 44
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 3e-48 44
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 7e-49 44
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 6e-48 44
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 6e-48 44
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 3e-46 43
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 3e-46 43
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 4e-48 43
Z1221 NP_286756.1 transposase Not tested TAI Protein 2e-46 43
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-46 43
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 2e-47 43
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-46 43
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 2e-47 43
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 1e-44 42
c5167 NP_757015.1 transposase IS629 Not tested PAI II CFT073 Protein 6e-31 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
tnp3504g2 YP_251380.1 transposase IS3504g VFG1602 Protein 8e-45 42