Gene Information

Name : tnp3508d (jk1259)
Accession : YP_251044.1
Strain : Corynebacterium jeikeium K411
Genome accession: NC_007164
Putative virulence/resistance : Unknown
Product : transposase IS3508d
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG3328
EC number : -
Position : 1480481 - 1481830 bp
Length : 1350 bp
Strand : +
Note : -

DNA sequence :
ATGACTGCTGTGTCACCGAAGAAAGGCCATGACCCGGCAAGGGTCAACGAGATCAGCGAGAAGCTGATGGAAAATCCTGA
GCTCGCTAGCTTGATCAGCGAGCTGTCGACGTCCGCTGATGATGCAAGCGACTTGGTCAAAGGCCTGCTGCAGGCATCGA
TCAACGCTGGTCTGCAGGCGGAAATGGATGCGCATTTGGGCTACGGACATTCCGACCGTAAGGCCAAAGCCCAGGTGGAA
GCCGCGCAGGAGAGCAATCACCGCAACGGGTCGTACACCAAGACCGTCAATTCTGGCTACGGTGCAGTGGAAGTGACCGT
GCCCAGGGATCGTGCCGGCACGTTTACACCGAAGATGGTGCCCAAGGGCGCACGTCGGCTGACAGAGCTCGACGATATGA
TCGTCTCGCTGTACGCCGGCGGGATGACAGTGCGCGATATTCAACACCATCTCGCAACCACGCTTGGGGTGGATATGAGC
CCGGATACGATCAGCACGATTACCGATGCGGTGTTAGACGAGGTCATGATCTGGCAAAACCGCCAGCTCGACGAGTTTTA
CCCGGTGATCTTCCTCGACGCACTCCGCGTCAAAATCCGTGACGGTCACCGCGTGGTCAACAAAGCCTGCTACATGGCTG
TTGGCATCGACATCGACGGCATCAAGCACATCTTGGGATTGTGGATCGCTGAAAATGAAGGCGCTGCATTCTGGGCATCG
GTGTGCGCGGATCTGGCCAACCGGGGTGTCCAAGACGTGTTCATCGTCTGCTGCGACGGGCTGAAAGGTCTACCGGAAGC
CGTGGAGGCAACCTGGCCGAATTCTATGGTGCAGACCTGCATCGTGCACCTAATTCGAGCTGCGAACCGGTGGGTGTCCT
ACCAGGACCGCAAATCTGTCTCCCGTGCGCTACGTGAGGTCTACACGGCCGCCAACGAGGACACCGCCCGGGCCAGCCTT
GATGCTTTCGAGGCCAGTGAACTGGGCCGTAAATACCCGCAGTCGGTCAAAGTCTGGCGCGACGCGTGGGAGCGGTTCAT
ACCGTTTCTGCAGTTCCCGCCGGCCGCACGCCGGGTGCTCTACACCACCAATTCAATCGAGTCGCTCAACGCTGAACTGC
GGAAAGCTACCCGTAACCGGGGGCAATTCCCGAACGATACTGCGGCGCTGAAAACGCTGTGGCTGATGATCTGCAACATC
GAAGACAAGCGCGCCGCCCAGCGAGCGAAGAAAGCGAAACGCGACATCGAATGCAACGGCTATATTGAAGGAGCGAAAGC
CACCGGGTGGAAACAAGCCATCAACCAACTAGCTGTGGCGTACCCCGACCGATTCGCGGACTACTTGTAA

Protein sequence :
MTAVSPKKGHDPARVNEISEKLMENPELASLISELSTSADDASDLVKGLLQASINAGLQAEMDAHLGYGHSDRKAKAQVE
AAQESNHRNGSYTKTVNSGYGAVEVTVPRDRAGTFTPKMVPKGARRLTELDDMIVSLYAGGMTVRDIQHHLATTLGVDMS
PDTISTITDAVLDEVMIWQNRQLDEFYPVIFLDALRVKIRDGHRVVNKACYMAVGIDIDGIKHILGLWIAENEGAAFWAS
VCADLANRGVQDVFIVCCDGLKGLPEAVEATWPNSMVQTCIVHLIRAANRWVSYQDRKSVSRALREVYTAANEDTARASL
DAFEASELGRKYPQSVKVWRDAWERFIPFLQFPPAARRVLYTTNSIESLNAELRKATRNRGQFPNDTAALKTLWLMICNI
EDKRAAQRAKKAKRDIECNGYIEGAKATGWKQAINQLAVAYPDRFADYL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp7109-23 YP_001800851.1 transposase for insertion sequence Not tested Not named Protein 0.0 95
CDHC03_2103 YP_005139146.1 transposase-like protein Not tested Not named Protein 0.0 92
tnp7109-31 YP_001800937.1 transposase for insertion sequence Not tested Not named Protein 6e-162 71
CPR_0630 YP_697957.1 ISCpe3, transposase Not tested Not named Protein 3e-73 44
api41 CAF28515.1 is285 transposase Not tested YAPI Protein 3e-73 42