Gene Information

Name : hfeC (NTHI0478)
Accession : YP_248075.1
Strain : Haemophilus influenzae 86-028NP
Genome accession: NC_007146
Putative virulence/resistance : Virulence
Product : ABC-type chelated iron transport system, permease
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 452977 - 453825 bp
Length : 849 bp
Strand : -
Note : Similar to: HI0360, Y360_HAEIN

DNA sequence : 
ATGTTAGATTTATTGCTCGAACCTTTTTCCTATGATTATATGCTCAAGGCGATGATTTTGAGTACCGCAGTGGGTGGCAT
TTGTGCTTTTTTGTCTTCATATTTAATGCTTAAAGGCTGGTCTCTAATTGGCGATGCGCTTTCCCATTCTGTCGTGCCCG
GTGTTGCAATTGCCTATGCTTTTGCGTTGCCTTACGCACTTGGTGCATTTTTTGCCGGAATTTTAGCCGCACTTTCCATT
CTTTGGATTAAATCCATTTCTAAACTGAAAGAAGATGCTGTGATAGGTTTTATTTTCAGTACTTTCTTTGCATTAGGTTT
GTTAATCGTTTCTTTAAATCCAACCGCAGTAAATGTGCAAAATATCATTTTAGGTAATATTTTAGGCATTGCCGATGACG
ATATTTACCAAGTCGCAATTATTATCGGTGTTTGTTTAGTATTACTTTTATTATTTTGGAAAGATTTACTACTGATTTTT
TTCGATGAAACACAAGCAAGAACGGTAGGGCTTTCGCCATTATTTTATAAAGTTTTATTTTTTACTTTATTAAGTGCTTG
TGTGGTCGCTGCATTACAAACTGTGGGGGCGATTTTAGTGATTGCGATGGTTATTACCCCTGGTGCAACAGCATATTTAC
TGACGGATAAATTCAAAACCTTGTCAATCATCGCCATTATTTTAGGAGCGGTGACAAGTTTTGTTGGTGTTTATATTAGC
TATTATTTAGATGGTGCCACAGGCGGTGTGATTGTGACATTGCAAACATTATTGTTTTTAGTCGCTTTCTTATTTTCACC
AAAATATGGCTTATTAACTCGTAATAAAAAGGCGGTAGAAAATGTTTGA

Protein sequence : 
MLDLLLEPFSYDYMLKAMILSTAVGGICAFLSSYLMLKGWSLIGDALSHSVVPGVAIAYAFALPYALGAFFAGILAALSI
LWIKSISKLKEDAVIGFIFSTFFALGLLIVSLNPTAVNVQNIILGNILGIADDDIYQVAIIIGVCLVLLLLFWKDLLLIF
FDETQARTVGLSPLFYKVLFFTLLSACVVAALQTVGAILVIAMVITPGATAYLLTDKFKTLSIIAIILGAVTSFVGVYIS
YYLDGATGGVIVTLQTLLFLVAFLFSPKYGLLTRNKKAVENV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-67 64
sitC NP_461784.1 permease Virulence SPI-1 Protein 9e-67 64
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 7e-67 64
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 7e-67 64
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 7e-67 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hfeC YP_248075.1 ABC-type chelated iron transport system, permease BAC0441 Protein 2e-71 71
hfeC YP_248075.1 ABC-type chelated iron transport system, permease BAC0351 Protein 4e-67 64

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
hfeC YP_248075.1 ABC-type chelated iron transport system, permease VFG0527 Protein 4e-67 64