Gene Information

Name : qseB (NTHI2016)
Accession : YP_249423.1
Strain : Haemophilus influenzae 86-028NP
Genome accession: NC_007146
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 1871799 - 1872464 bp
Length : 666 bp
Strand : -
Note : Similar to: HI1708, QSEB_HAEIN

DNA sequence : 
ATGAGAATTTTATTGATAGAAGACGATAATCTAATCGGCAATGGGTTGCAGATTGGTTTAACTAAACTTGGTTTTGCGGT
GGATTGGTTTACCGATGGAAAAACAGGAATGGCTGCTTTAACCTCTGCATCTTATGATGCGGTGGTATTGGATTTAACCT
TGCCTAAACTTGATGGATTAGATGTATTGCAACAATGGCGATCTAATCATCAAGATGTTCCCGTATTAATTTTGACTGCT
CGTGATACTTTAGATGAACGAGTTAAAGGTTTACAAAGTGGTGCAGATGATTATCTTTGCAAGCCTTTTGCTTTGGCTGA
AGTCGCCGCACGTTTACAAGCCCTTATTCGTCGTCGTTATGGATATCATCATTCTGTGATAGAACAGGCTGGTGTTAAGC
TAGATCAGAATCAACGTTCTGTTTGGCTGAATAATCAACCCATTTCTTTAACAAGCCGTGAATATAAATTGCTTGAATTA
TTTATGCTGAATAAAGATTGCGTATTGTCTCGCTCATCCATTGAAGAAAAATTATCCAGTTGGGATGAGGAAATTAGCAG
TGGCGCATTGGATGTGCATATTTATAATTTACGCCAAAAATTGGGGAAACAATTTATTCGCACGGTACACGGTGTTGGAT
ATGCTTTGGGACAAGTTGAAAAATGA

Protein sequence : 
MRILLIEDDNLIGNGLQIGLTKLGFAVDWFTDGKTGMAALTSASYDAVVLDLTLPKLDGLDVLQQWRSNHQDVPVLILTA
RDTLDERVKGLQSGADDYLCKPFALAEVAARLQALIRRRYGYHHSVIEQAGVKLDQNQRSVWLNNQPISLTSREYKLLEL
FMLNKDCVLSRSSIEEKLSSWDEEISSGALDVHIYNLRQKLGKQFIRTVHGVGYALGQVEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 2e-39 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_249423.1 transcriptional regulatory protein BAC0487 Protein 7e-40 46
qseB YP_249423.1 transcriptional regulatory protein BAC0638 Protein 2e-29 42
qseB YP_249423.1 transcriptional regulatory protein BAC0347 Protein 1e-28 41
qseB YP_249423.1 transcriptional regulatory protein BAC0111 Protein 2e-30 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_249423.1 transcriptional regulatory protein VFG0473 Protein 2e-39 43
qseB YP_249423.1 transcriptional regulatory protein VFG1390 Protein 3e-31 42