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Name : serS (NTHI0200) Accession : YP_247837.1 Strain : Haemophilus influenzae 86-028NP Genome accession: NC_007146 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 183462 - 184751 bp Length : 1290 bp Strand : + Note : Serine--tRNA ligase; SerRS; catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA DNA sequence : ATGATCGATCCAAATTTACTCCGTAATAATTTAGCAGAAGTCGCAGAAAAATTAAAAGTAAAACGCAACTTTATGCTTGA TACGGAAAAACTCACCGCGTTAGAAGATCAGCGCAAAAACTTACAAGTCACTACCGAAAACTTACAAGCGGAACGTAATG CTCGTTCCAAAGCCATTGGTGCTGCTAAAGTGCGTGGTGAAGATATCGCACCATTATTGGCAGAAATGGATGATATGGGC AATCAATTGACTGAAGCAAAAGCACAATTAGATGCGGTACTTGCAGAAATCAATCAAATTGCATTAAGTATTCCAAATCT ACCCGCAGACGAAGTGCCATTAGGCAAAGATGACACAGAAAATAAAGAAATCTTACGTTGGGGTACACCGCATACATTTG ATTTTGAAGTGAAAGATCATATCACTTTGGGTGAAGAAGCAAATGGCTTAGATTTTGCTGCTGGGGCTAAATTAGCTGGT GCGCGTTTTGCCGTAATGAAAGGTCAAATCGCTAAAATGCACCGCGCATTGGCACAATTCATGTTAGATCTTCATACTGA ACAACACGGCTATTTAGAAACCTATGTGCCTTATTTAGTAAATCACGCAACACTTTATGGTACAGGGCAATTACCAAAAT TCGGGGAAGATTTATTCCATACTTTAGCCTTAGAAGGCGAACAACCTTACGCATTAATTCCAACCGCAGAAGTGCCCGTC ACTAATTTAGTGCGTGATGTAATTATTGATGAAGCAGAATTACCAATAAAAATGACCGCACATACGCCATGTTTCCGTTC TGAAGCTGGCTCTTACGGTCGTGATACTCGTGGTTTAATTCGTATGCACCAATTTGATAAAGTAGAAATGGTACAAATCG TTGATCCAGATAAATCAATGGAAGCACTTGAAGAATTAACAGGTCATGCGGAAAAAGTATTGCAATTATTAAATTTACCA TACCGTAAAGTTTTACTTTGCACAGGCGATATGGGCTTTGGTTCTTGCAAAACTTACGATTTAGAAGTTTGGCTGCCTGC ACAAAATACTTATCGAGAAATTTCTTCTTGCTCAAATATGTGGGATTTCCAAGCTCGCCGTATGCAAGCTCGCTGTAAAG CAAAAGGCGATAAGAAAACTCGCTTAGTGCACACATTAAATGGTTCAGGCTTAGCGGTTGGTCGTACTTTAGTGGCTGTA CTTGAAAACTATCAAAATGCCGATGGTTCAATTACCGTGCCAGAAGAGCTACGTCCATATATGGGCGGATTAGACGTTAT CGGAAAATAA Protein sequence : MIDPNLLRNNLAEVAEKLKVKRNFMLDTEKLTALEDQRKNLQVTTENLQAERNARSKAIGAAKVRGEDIAPLLAEMDDMG NQLTEAKAQLDAVLAEINQIALSIPNLPADEVPLGKDDTENKEILRWGTPHTFDFEVKDHITLGEEANGLDFAAGAKLAG ARFAVMKGQIAKMHRALAQFMLDLHTEQHGYLETYVPYLVNHATLYGTGQLPKFGEDLFHTLALEGEQPYALIPTAEVPV TNLVRDVIIDEAELPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVDPDKSMEALEELTGHAEKVLQLLNLP YRKVLLCTGDMGFGSCKTYDLEVWLPAQNTYREISSCSNMWDFQARRMQARCKAKGDKKTRLVHTLNGSGLAVGRTLVAV LENYQNADGSITVPEELRPYMGGLDVIGK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 5e-97 | 53 |
