|
Name : NTHI1890 (NTHI1890) Accession : YP_249308.1 Strain : Haemophilus influenzae 86-028NP Genome accession: NC_007146 Putative virulence/resistance : Unknown Product : portal vertex protein Function : - COG functional category : R : General function prediction only COG ID : COG5518 EC number : - Position : 1727132 - 1728142 bp Length : 1011 bp Strand : + Note : Similar to: VPQ_BPP2 DNA sequence : ATGAGCAAAAAAACAAAAAAATCCACCGCACTTTCTACTGGAAATCAAGCACAGGCGTTCAGCTTTGGAGAGCCTATTCC AGTGATTGACCGTGCAGAAGTACTGAATTATTTCGAAAGCGTGGTGATGTATGAAAAATATTACAATCCGCCAATTAATT TAAGTTACTTGGCTAAAGCGTTAAATGCCTCAGCCCATCATAACAGTGCGATTACGGTGAAGAAAAACATTTTACTTTCA ACGTGCAAAACAACCGCACTTTTACCTCGAACCCAATTAGAAAAACTGGTGCAAGATTACTTGGTCTTTGGTAATGCTTA TGTTGAGAAAACTGTAAATTCCTTTGGTAAGGTTGTTTCGTTAAAATCCTCTCTTGCTAAATATATGCGTGTCGGTGTTG AAACAGGTGTGTTTTATCAGATTGTGAATGGTTTTGATGAATATGAATTTAAAAAAGGTTCTGTCTTTAACTTGATTAAT CCCGATGTGAATCAAGAGATTTATGGTGTGCCAGAATATTTGGCCGCACTTCAATCTGCTTTTTTAAATGAAAGTGCCAC ATTGTTCCGCTGTAAATATTATCTGAATGGCGCGCATGCAGGTTCGATTATTTACATGACTGATCCAACACAAAACAAAG ACGACATTGAAGCAATCAAAACACAAATCCGACAAACAAAAGGCACTGGCAACTTTAAGAATTTGTTTGTGTATATTCCA AACGGAAAGAAAGATGGGATGCAAGTTATTCCATTGTCTGATGCTATCGCCAAAGATGATTTCCTAAACATTAAGAACGC AAGCCGTGATGATGTGTTAGCTGCGCACCGTGTGCCACCGCAACTAATGGGCATTGTGCCTAATAATACAGGCGGTTTTG GTGACGTTGAAAAGGCAACGCGAGTGTTTTTTATCAATGAGATAATCCCATTGCAAGAACGATTGAAAGAAATTAATAGT TGGATAGGGGAAGAAGTGATCACATTCTCCGATTACAAATTGCTAAATTAG Protein sequence : MSKKTKKSTALSTGNQAQAFSFGEPIPVIDRAEVLNYFESVVMYEKYYNPPINLSYLAKALNASAHHNSAITVKKNILLS TCKTTALLPRTQLEKLVQDYLVFGNAYVEKTVNSFGKVVSLKSSLAKYMRVGVETGVFYQIVNGFDEYEFKKGSVFNLIN PDVNQEIYGVPEYLAALQSAFLNESATLFRCKYYLNGAHAGSIIYMTDPTQNKDDIEAIKTQIRQTKGTGNFKNLFVYIP NGKKDGMQVIPLSDAIAKDDFLNIKNASRDDVLAAHRVPPQLMGIVPNNTGGFGDVEKATRVFFINEIIPLQERLKEINS WIGEEVITFSDYKLLN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| t4321 | NP_807917.1 | capsid portal protein | Not tested | SPI-7 | Protein | 1e-95 | 58 |
| STY4628 | NP_458710.1 | probable capsid portal protein | Not tested | SPI-7 | Protein | 1e-95 | 58 |
| unnamed | ABR13463.1 | predicted capsid packaging protein | Not tested | PAGI-6 | Protein | 1e-75 | 50 |
