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Name : hsdR1 (NTHI0193) Accession : YP_247831.1 Strain : Haemophilus influenzae 86-028NP Genome accession: NC_007146 Putative virulence/resistance : Virulence Product : type I site-specific restriction-modification system, R subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0610 EC number : - Position : 175311 - 178337 bp Length : 3027 bp Strand : + Note : - DNA sequence : ATGGTTTCAGGAACTAAGGAAAAAGATTTAGAAATTGCCATCGAAAAAGCCTTAACTGGCACTTGGCGTGAAAACATGGA AAATAAGCTGGGCGAGCCGAAGGCTGAATACCTGCCGCGCCATCATGGTTTTAAACTGGCATTTTCACAGGATTTTGATG CGCAGTTTGCCATCGACACACGTCTGTTTTGGCAATTCCTGCAAACCAGCCAAGAGGCAGAACTTGCCCGTTTTCAACAA CTCAACCCAAACGACTGGCAGCGTAAAATTTTGGAGCGATTAGACCGCCAAATAAAGAAAAACGGCGTGTTGCACCTGCT GAAAAAAGGCTTGGATATTGATAGCGCCCATTTTGATTTGCTCTACCCCGTTCCGCTTGCCAGCAGCGGCGAAAAGGTCA AGCAGCGTTTTGAACAGAATTTGTTTAGCTGTATGCGTCAAGTGCCTTATTCTGCCTCAAGCAATGAAACGGTGGATATG GTGCTGTTTGCCAATGGCTTGCCGATTATTGCCCTTGAGCTGAAAAACCATTGGACAGGTCAGACAGCCATTGATGCGCA AAAACAATACCTCAACCGTGATTTAAGCCAAACGTTGTTCCATTTCGGGCGTTGTTTGGCGCATTTTGCCTTAGATACGG AAGAAGCTTATATGACCACCAAATTGGCGGGGCCTGCTACGTTTTTCTTGCCGTTTAACTTGGGCAACAACTGCGGTAAG GGTAATCCGCCCAATCCCAATGGACACCGCACGGCGTATTTATGGCAAGAGGTGTTCGGCAAAGCAAGCCTTGCCAACAT TATTCAGCATTTTATGCGCTTAGACGGTTCAACCAAAGATCCGTTGGATAAACGTACCCTCTTTTTCCCTCGCTATCACC AATTAGATGTGGTCCGCCGTTTGATTGCTGATGTCAGTGAACATGGCGTGGGTAAACGTTATTTGATTCAACATTCTGCC GGTTCGGGCAAGTCTAATTCCATTACTTGGCTGGCGTATCAGTTGATTGAGGCATATCCGCGCAATGAAAAGGCGGCAAA CGGTAGAGAGGCAGACCGCCCGATTTTTGATTCGGTGATTGTCGTAACCGACCGTCGTTTGTTGGATAAGCAACTGCGCG ACAATATCAAAGATTTTTCAGAAGTTAAAAACATTGTTGCGCCGGCGTTGAGTTCGGCAGAGTTGCGCCAATCGCTTGAG CAGGGCAAAAAAATCATTATTACCACGATTCAAAAATTCCCGTTTATTGTCGATGGCATTGCTGATTTAGGCGACAAACA ATTTGCGGTGATTATTGATGAGGCACACAGCTCACAATCAGGTTCGGCACACGACAATATGAACCGGGCCATCGGCAAAA CGGAAGACCTTGATGCTGAAGATGTGCAAGATTTGATTTTACAAACCATGCAATCCCGCAAAATGCACGGCAATGCGTCG TATTTTGCTTTCACCGCCACACCGAAAAACAGCACTTTGGAAAAATTCGGCGAAAAACAGGCGGATGGCAAGTTTAAGCC GTTCCACCTTTATTCTATGAAGCAGGCGATTGAAGAAGGCTTTATTTTGGATGTAATCGCCAATTACACCACCTATAAAA GTTTTTATGAGATCACTAAGTCGATTGAAGATAATCCGGAGTTTGATAGTAAAAAGGCTCAAAGCCGTCTGAAAGCCTAT GTGGAGCGTTCGCAACAAACGATTGATACTAAAGCGGAGATAATGCTGGATCATTTTATTTACCAAGTTTTCAACCGTAA AAAACTCAAAGGCAAAGCCAAGGGAATGGTGGTAACGCAAAATATTGAAACCGCCATCCGCTATTTTCAGGCGTTAAAAC ATTTGCTGGCCGGGCGGGGTAATCCGTTTAAAATTGCGATTGCGTTTTCAGGCAGTAAAGTGGTTGACGGTGTCGAATAC ACCGAAGCGGAAATGAACGGCTTTGCAGAAAGCGAAACCAAAGAGTATTTCGATCAAGATGAATATCGTTTGCTGGTGGT CGCCAATAAATATCTGACCGGTTTCGATCAGCCGAAATTGTGTGCCATGTATGTGGATAAGAAACTCTCCGGCGTGCTTT GCGTGCAGGCTTTATCTCGTTTGAATCGCAGTGCGAATAAGTTGAGTAAACGCACGGAAGATTTGTTTGTATTGGACTTT TTTAACAGCGTTGAAGATATTCAGCAGGCATTTGAGCCGTTTTATACTTCTACTTCGTTGTCGCAGGCAACCGATGTCAA TGTCTTGCATGATTTGAAAGACCGGTTGGATGAAACCGGCGTGTACGAACAAGCGGAGGTCAACGATTTTACTGAAGGCT ATTTTGCCAATAAAGACGCACAGCAATTAAGCAGTATGATTGATGTGGCTGTCCAACGTTTTGATGATGAATTGGAATTG GATTTGGATCGAAATGAAAAAGTTGATTTTAAAATCAAGGCAAAACAGTTTTTAAAAATTTACGGGCAAATGGCCTCCAT CATCAATTTTGAAAATATCGCTTGGGAAAAGCTCTATTGGTTCCTCAAATTCTTAGTACCCAAATTAAAAGTACAAGACC CGATGGATGAATTTGATGAAATTTTAGATGCAGTGGATTTAAGCTCTTACGGCTTGGCGCGCACCAAGCTGAATTACAGC ATTAAATTAGATGATGAAGAAACAGAGCTTGACCCGCAAAACCCCAATCCGCGCGGTACGCATGGTGAAGATAAAGAAAA AGATCCGATTGATGAAATTATTCGTGTATTTAACGAAAGATGGTTTCAAGATTGGAGCGCAACGCCGGATGAGCAACGGG TAAAATTTATCAATATTACCGAGCGCATCCGCAGCCATAAAGACTTTGAGCAGAAATATCAAAATAACCCGGATATTCAT ACCCGTGAATTGGCTTTCCAAGCCATTTTGCGCGATGTGATGAGCGAACGCCATAGGGATGAATTAGAGCTATACAAACT TTTTGCCAAAGATGCCGCATTTAGAACCGCTTGGACGCAAAGTTTGCAACGGGCTTTGGCTGGATAG Protein sequence : MVSGTKEKDLEIAIEKALTGTWRENMENKLGEPKAEYLPRHHGFKLAFSQDFDAQFAIDTRLFWQFLQTSQEAELARFQQ LNPNDWQRKILERLDRQIKKNGVLHLLKKGLDIDSAHFDLLYPVPLASSGEKVKQRFEQNLFSCMRQVPYSASSNETVDM VLFANGLPIIALELKNHWTGQTAIDAQKQYLNRDLSQTLFHFGRCLAHFALDTEEAYMTTKLAGPATFFLPFNLGNNCGK GNPPNPNGHRTAYLWQEVFGKASLANIIQHFMRLDGSTKDPLDKRTLFFPRYHQLDVVRRLIADVSEHGVGKRYLIQHSA GSGKSNSITWLAYQLIEAYPRNEKAANGREADRPIFDSVIVVTDRRLLDKQLRDNIKDFSEVKNIVAPALSSAELRQSLE QGKKIIITTIQKFPFIVDGIADLGDKQFAVIIDEAHSSQSGSAHDNMNRAIGKTEDLDAEDVQDLILQTMQSRKMHGNAS YFAFTATPKNSTLEKFGEKQADGKFKPFHLYSMKQAIEEGFILDVIANYTTYKSFYEITKSIEDNPEFDSKKAQSRLKAY VERSQQTIDTKAEIMLDHFIYQVFNRKKLKGKAKGMVVTQNIETAIRYFQALKHLLAGRGNPFKIAIAFSGSKVVDGVEY TEAEMNGFAESETKEYFDQDEYRLLVVANKYLTGFDQPKLCAMYVDKKLSGVLCVQALSRLNRSANKLSKRTEDLFVLDF FNSVEDIQQAFEPFYTSTSLSQATDVNVLHDLKDRLDETGVYEQAEVNDFTEGYFANKDAQQLSSMIDVAVQRFDDELEL DLDRNEKVDFKIKAKQFLKIYGQMASIINFENIAWEKLYWFLKFLVPKLKVQDPMDEFDEILDAVDLSSYGLARTKLNYS IKLDDEETELDPQNPNPRGTHGEDKEKDPIDEIIRVFNERWFQDWSATPDEQRVKFINITERIRSHKDFEQKYQNNPDIH TRELAFQAILRDVMSERHRDELELYKLFAKDAAFRTAWTQSLQRALAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VPI2_0013c | ACA01830.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 68 |
| VC1765 | NP_231400.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 68 |
| VC0395_A1363 | YP_001217306.1 | type I restriction enzyme HsdR | Not tested | VPI-2 | Protein | 0.0 | 68 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hsdR1 | YP_247831.1 | type I site-specific restriction-modification system, R subunit | VFG1098 | Protein | 0.0 | 68 |
