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Name : hsdM1 (NTHI0188) Accession : YP_247828.1 Strain : Haemophilus influenzae 86-028NP Genome accession: NC_007146 Putative virulence/resistance : Virulence Product : type I restriction-modification system, methyltransferase subunit Function : - COG functional category : V : Defense mechanisms COG ID : COG0286 EC number : - Position : 169825 - 172197 bp Length : 2373 bp Strand : + Note : - DNA sequence : ATGGAGCATTCTGTTCATAACAAACTGGTTTCTTTTATTTGGAGTATTGCAGACGATTGTCTGCGCGATGTGTATGTGCG CGGTAAATATCGTGATGTGATTTTACCGATGTTTGTGCTTCGTCGTTTGGATACTTTACTTGAGCCAAGCAAAGATGCCG TATTGGAAGAAATGCGTTTTCAAAAAGAAGAATTGGCATTCACCGAATTGGATGACCTTCCCCTTAAAAAAATTACCGGT CATGTTTTTTATAACACCTCAAAATGGACATTAAAATCCCTCTATCAAACCGCCAGCAATACGCCGCAGTATATGCTGGC CAATTTTGAAGAATATCTTGATGGTTTCAGCACCAACATTCATGAAATCATCAACTGCTTCAAGCTGCGTGAACAAATCC GCCATATGTCCCATAAAAATGTTTTGCTGAGCGTGTTGGAAAAATTTGTATCGCCCTATATCAATCTTACCCCTAAAGAA CAACAAGACCCTGAGGGCAACAAATTACCAGCGCTGACCAATCTGGGCATGGGCTATGTATTTGAAGAACTGATTCGTAA ATTTAACGAAGAAAATAACGAAGAAGCTGGCGAACACTTTACCCCACGCGAAGTGATCGAGCTGATGACGCATTTAGTCT TTGATCCGCTCAAAGACCAAATTCCGGCCATTATTACGATTTACGACCCAGCTTGCGGCAGCGGTGGCATGCTGACCGAG TCGCAAAACTTTATTGAGCAAAAATATCCGCTATCTGAATCACAAGGCGAGCGTTCCATCTTTTTGTTTGGTAAAGAAAC CAATGATGAAACCTATGCCATTTGTAAATCTGACATGATGATTAAAGGTGATAATCCCGAAAACATCAAAGTCGGCTCAA CCCTTGCTACAGATAGCTTCCAAGGTAATCACTTTGACTTTATGCTTTCCAACCCGCCATATGGCAAAAGCTGGAGCAAA GATCAAGCCTATATCAAAGACGGCAATGAGGTTATCGACAGTCGCTTTAAAGTTACCTTACCAGATTACTGGGGCAATGT AGAAACCCTTGATGCTACCCCACGCTCCAGCGATGGACAGCTGCTATTCCTAATGGAAATGGTCAGCAAAATGAAATCGC CGAATGACAACAAAATCGGCAGCCGAGTGGCCTCCGTGCATAACGGCTCAAGCCTGTTTACCGGCGATGCAGGTTCAGGA GAAAGCAACATTCGTCGCCATATTATTGAAAAAGATTTGCTCGAAGCCATCGTACAGCTGCCTAACAACCTGTTTTATAA CACAGGTATTACCACTTATATTTGGTTGCTGTCCAACAACAAACCTGAAGCACGCAAAGGCAAAGTTCAGCTCATTGATG CCAGCCTCTTATTCCGCAAATTGCGTAAAAACCTTGGCGATAAAAACTGCGAATTTGTACCTGAACATATCGCCGAAATT ACCCAAAACTATCTTGATTTCACTGCCAAAGCGCGCGAAACCGACAGCCAAAATGAAGCAGTCGGCCTGGCTTCGCAGAT TTTTGACAATCAAGATTTCGGCTATTACAAAGTCACCATCGAACGCCCGGATCGCCGTTCTGCCCAATTTACCGCCGAAA ATATCTCGCCTTTACGGTTTGACAAGGCTTTGTTTGAGCCGATGCAATATCTTTATCGGCAATATGGCGAACAAATTTAC AACGCCGGATTTTTAGCCCAAACCGAGCAAGAAATTACCGCTTGGTGCGAAGCGCAGGGCATAGCCTTAAACAACAAAAA CAAGACCAAGCTGCTGGACGTCAAAACCTGGGAAAAAGCCGCCGCACTTTTTCAGACGGCATCAACCTTGCTCGAACATT TCGGCGAACAACAATTTGACGATTTCAACCAATTCAAACAAGCCGTGGAATGCCGTCTGAAAGCCGAAAAAATCCCCCTT TCTGCCACAGAGAAAAAGGCCGTTTTCAATGCCGTAAGTTGGTACGACGAAAATTCAGCCAAAGTGATTGCCAAAACACT CAAGCTCAAACCAAACGAATTGGACGCCCTTTGCCAACGCTACCAATGCCAAGCCGACGAGCTGGCAGACTTTGGCTATT ACGCCACCGGCAAAGCAGGCGAATATATCCTATATGAAACGAGCAGCGACTTGCGCGACAGCGAATCCATACCGCTCAAA CAAAATATCCACGACTATTTCAAAGCCGAAGTGCAAGCGCACATCAGCGAAGCATGGCTGAATATGGAAAGCGTAAAAAT CGGCTATGAAATCAGCTTCAACAAATACTTCTACCGCCACAAACCATTACGCAGCCTTGCAGAAGTTGCCCAAGATATTT TGGCGTTAGAAAAACAGGCTGACGGCTTGATTAGTGAAATTCTAGAGGCTTAA Protein sequence : MEHSVHNKLVSFIWSIADDCLRDVYVRGKYRDVILPMFVLRRLDTLLEPSKDAVLEEMRFQKEELAFTELDDLPLKKITG HVFYNTSKWTLKSLYQTASNTPQYMLANFEEYLDGFSTNIHEIINCFKLREQIRHMSHKNVLLSVLEKFVSPYINLTPKE QQDPEGNKLPALTNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPLKDQIPAIITIYDPACGSGGMLTE SQNFIEQKYPLSESQGERSIFLFGKETNDETYAICKSDMMIKGDNPENIKVGSTLATDSFQGNHFDFMLSNPPYGKSWSK DQAYIKDGNEVIDSRFKVTLPDYWGNVETLDATPRSSDGQLLFLMEMVSKMKSPNDNKIGSRVASVHNGSSLFTGDAGSG ESNIRRHIIEKDLLEAIVQLPNNLFYNTGITTYIWLLSNNKPEARKGKVQLIDASLLFRKLRKNLGDKNCEFVPEHIAEI TQNYLDFTAKARETDSQNEAVGLASQIFDNQDFGYYKVTIERPDRRSAQFTAENISPLRFDKALFEPMQYLYRQYGEQIY NAGFLAQTEQEITAWCEAQGIALNNKNKTKLLDVKTWEKAAALFQTASTLLEHFGEQQFDDFNQFKQAVECRLKAEKIPL SATEKKAVFNAVSWYDENSAKVIAKTLKLKPNELDALCQRYQCQADELADFGYYATGKAGEYILYETSSDLRDSESIPLK QNIHDYFKAEVQAHISEAWLNMESVKIGYEISFNKYFYRHKPLRSLAEVAQDILALEKQADGLISEILEA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC1769 | NP_231404.1 | DNA methylase HsdM | Not tested | VPI-2 | Protein | 0.0 | 71 |
| VC0395_A1367 | YP_001217310.1 | DNA methylase HsdM | Not tested | VPI-2 | Protein | 0.0 | 71 |
| VPI2_0017c | ACA01834.1 | DNA methylase HsdM | Not tested | VPI-2 | Protein | 0.0 | 71 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| hsdM1 | YP_247828.1 | type I restriction-modification system, methyltransferase subunit | VFG1102 | Protein | 0.0 | 71 |
